RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 RC3H2Q9HBD1 1191 aaKnown RBP10.55□□□□□ -0.72
TCOF1-204ENST00000427724 SNX15Q9NRS6 342 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 DDX60Q8IY21 1712 aaKnown RBP10.55□□□□□ -0.72
TCOF1-204ENST00000427724 A0A1W2PQU0 124 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 TRPC5OSA6NMA1 111 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 PRMT5O14744 637 aaPredicted RBP10.55□□□□□ -0.72
TCOF1-204ENST00000427724 BIRC5O15392 142 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 KRT6AP02538 564 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 KRT6BP04259 564 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 ALPIP09923 528 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 LAMP2P13473 410 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 CRHR1P34998 444 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 KRT6CP48668 564 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 TRPC1P48995 793 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 SEPHS1P49903 392 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 SLC10A7Q0GE19 358 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 MBTPS1Q14703 1052 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 EIF4HQ15056 248 aaKnown RBP10.55□□□□□ -0.72
TCOF1-204ENST00000427724 MYLK3Q32MK0 819 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 B3GNT9Q6UX72 402 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 MPP5Q8N3R9 675 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 SHKBP1Q8TBC3 707 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 NUS1Q96E22 293 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 CNDP1Q96KN2 507 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 TBATAQ96M53 351 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 CCDC167Q9P0B6 97 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 PADI4Q9UM07 663 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 RBMX2Q9Y388 322 aaKnown RBP10.55□□□□□ -0.72
TCOF1-204ENST00000427724 PAPPA2Q9BXP8 1791 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 BDP1A6H8Y1 2624 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 FAM47E-STBD1D6RA91 191 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 LSM1O15116 133 aaKnown RBP10.55□□□□□ -0.72
TCOF1-204ENST00000427724 HSPA13P48723 471 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 AQP4P55087 323 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 SLC25A11Q02978 314 aaKnown RBP10.55□□□□□ -0.72
TCOF1-204ENST00000427724 NFATC2Q13469 925 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 PRKD1Q15139 912 aaPredicted RBP10.55□□□□□ -0.72
TCOF1-204ENST00000427724 FUT11Q495W5 492 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 FAM26DQ5JW98 314 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 MLIPQ5VWP3 458 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 CCDC80Q76M96 950 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 GPSM1Q86YR5 675 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 CMASQ8NFW8 434 aaPredicted RBP10.55□□□□□ -0.72
TCOF1-204ENST00000427724 OVCA2Q8WZ82 227 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 RMND5BQ96G75 393 aaPredicted RBP10.55□□□□□ -0.72
TCOF1-204ENST00000427724 XYLT2Q9H1B5 865 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 KCNK6Q9Y257 313 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 PCDHB3Q9Y5E6 796 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 AP4B1Q9Y6B7 739 aa10.55□□□□□ -0.72
TCOF1-204ENST00000427724 KHNYNO15037 678 aaKnown RBP10.54□□□□□ -0.72
TCOF1-204ENST00000427724 ZNF217O75362 1048 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 F7P08709 466 aaPredicted RBP10.54□□□□□ -0.72
TCOF1-204ENST00000427724 TYRP1P17643 537 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 ME2P23368 584 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 GPRIN1Q7Z2K8 1008 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 LDB1Q86U70 411 aaPredicted RBP10.54□□□□□ -0.72
TCOF1-204ENST00000427724 RNF31Q96EP0 1072 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 HSPA12BQ96MM6 686 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 BBS4Q96RK4 519 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 RIOK2Q9BVS4 552 aaKnown RBP10.54□□□□□ -0.72
TCOF1-204ENST00000427724 PNPLA8Q9NP80 782 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 KCTD5Q9NXV2 234 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 OPTCQ9UBM4 332 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 SNX5Q9Y5X3 404 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 TNRC6CQ9HCJ0 1690 aaKnown RBP10.54□□□□□ -0.72
TCOF1-204ENST00000427724 A0A0D9SEW6 157 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 ZBTB42B2RXF5 422 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 J3KR12 359 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 MATN3O15232 486 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 SIN3BO75182 1162 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 OR6B1O95007 311 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 SEMA4FO95754 770 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 MPOP05164 745 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 ZNF8P17098 575 aaPredicted RBP10.54□□□□□ -0.72
TCOF1-204ENST00000427724 TSPAN8P19075 237 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 UGT1A6P19224 532 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 UGT1A1P22309 533 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 UGT1A4P22310 534 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 RPL10P27635 214 aaKnown RBP10.54□□□□□ -0.72
TCOF1-204ENST00000427724 UGT1A3P35503 534 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 UGT1A5P35504 534 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 NR6A1Q15406 480 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 DPY19L3Q6ZPD9 716 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 USP53Q70EK8 1073 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 AMZ2Q86W34 360 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 NIPA2Q8N8Q9 360 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 TERB1Q8NA31 727 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 BHLHE22Q8NFJ8 381 aaPredicted RBP10.54□□□□□ -0.72
TCOF1-204ENST00000427724 METTL21AQ8WXB1 218 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 SLC7A6OSQ96CW6 309 aaPredicted RBP10.54□□□□□ -0.72
TCOF1-204ENST00000427724 PRR11Q96HE9 360 aaPredicted RBP10.54□□□□□ -0.72
TCOF1-204ENST00000427724 DPYSL5Q9BPU6 564 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 ZBP1Q9H171 429 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 SLC7A8Q9UHI5 535 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 FBXO5Q9UKT4 447 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.54□□□□□ -0.72
TCOF1-204ENST00000427724 M0QZQ0 153 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 LEFTY1O75610 366 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 TRMUO75648 421 aaKnown RBP10.54□□□□□ -0.72
TCOF1-204ENST00000427724 APBB3O95704 486 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms