RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 EVI2BP34910 448 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 RFC4P35249 363 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 HMGCLP35914 325 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 NUP62P37198 522 aaPredicted RBP5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 MAGEA3P43357 314 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 NPY2RP49146 381 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 ALDH9A1P49189 494 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 HK3P52790 923 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 LIMK2P53671 638 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 ITGA1P56199 1179 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 TAS2R40P59535 323 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 RPS6P62753 249 aaKnown RBP5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 NKX3-2P78367 333 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 HSF2Q03933 536 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 AQP6Q13520 282 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 PRPSAP1Q14558 356 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 USP10Q14694 798 aaKnown RBP5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 GRK1Q15835 563 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 SNRNP35Q16560 246 aaKnown RBP5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 ECM1Q16610 540 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 KIF19Q2TAC6 998 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 BTBD16Q32M84 506 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 AGKQ53H12 422 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 SETMARQ53H47 684 aaPredicted RBP5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 CCDC157Q569K6 752 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 COLEC12Q5KU26 742 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 SLC35F1Q5T1Q4 408 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 PXDC1Q5TGL8 231 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 C8orf82Q6P1X6 216 aaPredicted RBP5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 CASC4Q6P4E1 433 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 CYP2R1Q6VVX0 501 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 DBX2Q6ZNG2 339 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 C1orf186Q6ZWK4 172 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 PGAP1Q75T13 922 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 GDPD3Q7L5L3 318 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 KRT74Q7RTS7 529 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 FAM83AQ86UY5 434 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 FAM124AQ86V42 546 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 EPHX4Q8IUS5 362 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 OR8H2Q8N162 312 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 PELI3Q8N2H9 469 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 MIER2Q8N344 545 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 C1orf52Q8N6N3 182 aaKnown RBP5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 RNF148Q8N7C7 305 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 CAMKVQ8NCB2 501 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 CHDHQ8NE62 594 aaPredicted RBP5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 OR8H1Q8NGG4 311 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 OR8K3Q8NH51 312 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 NDNFQ8TB73 568 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 SLC7A14Q8TBB6 771 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 GRIN3AQ8TCU5 1115 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 ELMO1Q92556 727 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 AP3S1Q92572 193 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 TCEAL3Q969E4 200 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 PMEPA1Q969W9 287 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 CREB3L1Q96BA8 519 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 DCPSQ96C86 337 aaKnown RBP5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 TOE1Q96GM8 510 aaKnown RBP5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 MSANTD3Q96H12 275 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 NGLY1Q96IV0 654 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 VPS39Q96JC1 886 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 RNF170Q96K19 258 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 MARK4Q96L34 752 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 HSFY1Q96LI6 401 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 TEKT5Q96M29 485 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 KREMEN1Q96MU8 473 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 UROC1Q96N76 676 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 WDFY2Q96P53 400 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 OR52B2Q96RD2 323 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 NPAS2Q99743 824 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 EIF2AK1Q9BQI3 630 aaKnown RBP5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 ACE2Q9BYF1 805 aaPredicted RBP5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 SLC19A3Q9BZV2 496 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 C20orf27Q9GZN8 174 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 SDCBP2Q9H190 292 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 PIGUQ9H490 435 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 LDAHQ9H6V9 325 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 NT5DC2Q9H857 520 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 RNF121Q9H920 327 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 MEAF6Q9HAF1 191 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 VAT1LQ9HCJ6 419 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 KRT84Q9NSB2 600 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 OLA1Q9NTK5 396 aaKnown RBP5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 MCUBQ9NWR8 336 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 PGPEP1Q9NXJ5 209 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 IL37Q9NZH6 218 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 TRPM5Q9NZQ8 1165 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 SRRDQ9UH36 339 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 PFDN2Q9UHV9 154 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 ENOPH1Q9UHY7 261 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 RIPK3Q9Y572 518 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 MAB21L2Q9Y586 359 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 PCDHGA8Q9Y5G5 932 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 RNF215Q9Y6U7 377 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 DDX60LQ5H9U9 1706 aaKnown RBP5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 NAV1Q8NEY1 1877 aa5.56□□□□□ -1.52
VTI1BP4-201ENST00000427516 KCPQ6ZWJ8 1503 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 A0A087X1B8 175 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 A0A096LPK6 155 aa5.55□□□□□ -1.52
VTI1BP4-201ENST00000427516 A0A0B4J203 849 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms