RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 KRT37O76014 449 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 KRT38O76015 456 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 MT-ND3P03897 115 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 CEACAM5P06731 702 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 THEGLP0DJG4 465 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 CCR7P32248 378 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 NSG1P42857 185 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 GNPDA1P46926 289 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 HSPA14Q0VDF9 509 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 DLG1Q12959 904 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 ADAMTSL4Q6UY14 1074 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 KIAA0408Q6ZU52 694 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 CEP68Q76N32 757 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 SFTPA2Q8IWL1 248 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 GOLGA6L1Q8N7Z2 621 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 KCTD4Q8WVF5 259 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 SGSM3Q96HU1 749 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 VPS35Q96QK1 796 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 C1QTNF7Q9BXJ2 289 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 DUSP15Q9H1R2 295 aaPredicted RBP13.25□□□□□ -0.29
PRPF39-202ENST00000424478 SMOXQ9NWM0 555 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 NFKBIL1Q9UBC1 381 aaPredicted RBP13.25□□□□□ -0.29
PRPF39-202ENST00000424478 IKZF3Q9UKT9 509 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 SUFUQ9UMX1 484 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 ADAMTS9Q9P2N4 1935 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 CFAP54Q96N23 3096 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 IQANK1A0A1B0GTG1 560 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 PATE3B3GLJ2 98 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 C2P06681 752 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 CELA2BP08218 269 aaPredicted RBP13.24□□□□□ -0.29
PRPF39-202ENST00000424478 MAGEA9P43362 315 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 CACNA1EQ15878 2313 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 CERS6Q6ZMG9 384 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 TRABD2AQ86V40 505 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 SPDYE1Q8NFV5 336 aaPredicted RBP13.24□□□□□ -0.29
PRPF39-202ENST00000424478 SH3GL2Q99962 352 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 ROPN1BQ9BZX4 212 aaPredicted RBP13.24□□□□□ -0.29
PRPF39-202ENST00000424478 ROPN1Q9HAT0 212 aaPredicted RBP13.24□□□□□ -0.29
PRPF39-202ENST00000424478 TRIM39Q9HCM9 518 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 TM9SF3Q9HD45 589 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 PSMD13Q9UNM6 376 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 KCNK6Q9Y257 313 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 ARHGEF17Q96PE2 2063 aaPredicted RBP13.24□□□□□ -0.29
PRPF39-202ENST00000424478 PLXND1Q9Y4D7 1925 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 IGLV3-16A0A075B6K0 115 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 A0A096LPK6 155 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 C10orf142B7Z368 130 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 PRAMEF26H0Y7S4 382 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 SLC35E2BP0CK96 405 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 ACP5P13686 325 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 RPL10P27635 214 aaKnown RBP13.24□□□□□ -0.29
PRPF39-202ENST00000424478 CCR5P51681 352 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 THOP1P52888 689 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 NFE2L1Q14494 772 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 AGERQ15109 404 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 MAMSTRQ6ZN01 415 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 WDR5BQ86VZ2 330 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 HID1Q8IV36 788 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 MGARPQ8TDB4 240 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 NRTNQ99748 197 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 TMEM109Q9BVC6 243 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 CARS2Q9HA77 564 aaKnown RBP13.24□□□□□ -0.29
PRPF39-202ENST00000424478 GPAMQ9HCL2 828 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 PHPT1Q9NRX4 125 aaPredicted RBP13.24□□□□□ -0.29
PRPF39-202ENST00000424478 RAD18Q9NS91 495 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 ZNF180Q9UJW8 692 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 GPSM3Q9Y4H4 160 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 MYCLP1P12525 358 aaPredicted RBP13.24□□□□□ -0.29
PRPF39-202ENST00000424478 AK4P27144 223 aaPredicted RBP13.24□□□□□ -0.29
PRPF39-202ENST00000424478 PDHA2P29803 388 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 PTPN5P54829 565 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 SLC12A2P55011 1212 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 PFN3P60673 137 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 C1orf61Q13536 156 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 MPP2Q14168 576 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 CSHL1Q14406 222 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 PLK5Q496M5 336 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 LDLRAP1Q5SW96 308 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 FAM83HQ6ZRV2 1179 aaPredicted RBP13.24□□□□□ -0.29
PRPF39-202ENST00000424478 BMP8AQ7Z5Y6 402 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 TDRPQ86YL5 185 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 MDM1Q8TC05 714 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 GAB3Q8WWW8 586 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 ELMO1Q92556 727 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 PIGKQ92643 395 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 ULK4Q96C45 1275 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 TCF12Q99081 682 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 CDH19Q9H159 772 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 LGALS13Q9UHV8 139 aa13.24□□□□□ -0.29
PRPF39-202ENST00000424478 CFAP20Q9Y6A4 193 aaKnown RBP13.24□□□□□ -0.29
PRPF39-202ENST00000424478 CACNB4O00305 520 aaPredicted RBP13.23□□□□□ -0.29
PRPF39-202ENST00000424478 STMN1P16949 149 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 CD27P26842 260 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 PDAP1Q13442 181 aaKnown RBP13.23□□□□□ -0.29
PRPF39-202ENST00000424478 ACSBG2Q5FVE4 666 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 FBXO48Q5FWF7 155 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 LPCAT2Q7L5N7 544 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 PIWIL4Q7Z3Z4 852 aaKnown RBP13.23□□□□□ -0.29
PRPF39-202ENST00000424478 OR2I1PQ8NGU4 316 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 CD200R1Q8TD46 325 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms