RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 TMBIM1Q969X1 311 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 VPS33AQ96AX1 596 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 SDCCAG3Q96C92 435 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 PABPC5Q96DU9 382 aaKnown RBP15.06■□□□□ 0
C9orf3-204ENST00000424143 PDLIM5Q96HC4 596 aaKnown RBP15.06■□□□□ 0
C9orf3-204ENST00000424143 CDKN2AIPNLQ96HQ2 116 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 TEX37Q96LM6 180 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 RNF145Q96MT1 663 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 TRIB3Q96RU7 358 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 SH3GL1Q99961 368 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 RBM4BQ9BQ04 359 aaKnown RBP15.06■□□□□ 0
C9orf3-204ENST00000424143 MTG1Q9BT17 334 aaPredicted RBP15.06■□□□□ 0
C9orf3-204ENST00000424143 RBM4Q9BWF3 364 aaKnown RBP15.06■□□□□ 0
C9orf3-204ENST00000424143 LHPPQ9H008 270 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 HMG20AQ9NP66 347 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 ATAD3AQ9NVI7 634 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 FAM118AQ9NWS6 357 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 IL37Q9NZH6 218 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 GIMAP2Q9UG22 337 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 BTRCQ9Y297 605 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 MED16Q9Y2X0 877 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 ARIH1Q9Y4X5 557 aaPredicted RBP15.06■□□□□ 0
C9orf3-204ENST00000424143 TRPV2Q9Y5S1 764 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 HSPE1-MOB4S4R3N1 261 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 LRRC14BA6NHZ5 514 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 TTC36A6NLP5 189 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 K7EPI3 171 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 SLC16A6O15403 523 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 SYNCRIPO60506 623 aaKnown RBP15.06■□□□□ 0
C9orf3-204ENST00000424143 PRAMEF11O60813 436 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 RHOBTB1O94844 696 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 SLC4A1P02730 911 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 NTRK1P04629 796 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 HAPLN1P10915 354 aaPredicted RBP15.06■□□□□ 0
C9orf3-204ENST00000424143 NCK1P16333 377 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 IL12AP29459 219 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 CLCN4P51793 760 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 PLA2G16P53816 162 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 SEMA3AQ14563 771 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 PLA2G4EQ3MJ16 856 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 ATP6AP1LQ52LC2 224 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 PAQR3Q6TCH7 311 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 AGMOQ6ZNB7 445 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 NECAB2Q7Z6G3 386 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 LRRTM3Q86VH5 581 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 PGBD5Q8N414 524 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 RYBPQ8N488 228 aaPredicted RBP15.06■□□□□ 0
C9orf3-204ENST00000424143 DTWD1Q8N5C7 304 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 CHDHQ8NE62 594 aaPredicted RBP15.06■□□□□ 0
C9orf3-204ENST00000424143 GIPC2Q8TF65 315 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 SUSD3Q96L08 255 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 HGH1Q9BTY7 390 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 BEGAINQ9BUH8 593 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 ZNF225Q9UK10 706 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 PDE10AQ9Y233 779 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 KCTD3Q9Y597 815 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 TNPO3Q9Y5L0 923 aaKnown RBP15.06■□□□□ 0
C9orf3-204ENST00000424143 OR51F1A6NGY5 319 aa15.05■□□□□ -0
C9orf3-204ENST00000424143 BOLA2-SMG1P6H3BVE0 249 aa15.05■□□□□ -0
C9orf3-204ENST00000424143 ANKRD28O15084 1053 aa15.05■□□□□ -0
C9orf3-204ENST00000424143 EIF2S1P05198 315 aaKnown RBP15.05■□□□□ -0
C9orf3-204ENST00000424143 CES1P23141 567 aa15.05■□□□□ -0
C9orf3-204ENST00000424143 APLP1P51693 650 aa15.05■□□□□ -0
C9orf3-204ENST00000424143 HNRNPFP52597 415 aaKnown RBP15.05■□□□□ -0
C9orf3-204ENST00000424143 ZNF140P52738 457 aaPredicted RBP15.05■□□□□ -0
C9orf3-204ENST00000424143 TBX4P57082 545 aa15.05■□□□□ -0
C9orf3-204ENST00000424143 OCA2Q04671 838 aa15.05■□□□□ -0
C9orf3-204ENST00000424143 PLCL1Q15111 1095 aa15.05■□□□□ -0
C9orf3-204ENST00000424143 PCBP2Q15366 365 aaKnown RBP eCLIP15.05■□□□□ -01e-6■■■□□ 17.9
C9orf3-204ENST00000424143 MS4A13Q5J8X5 152 aa15.05■□□□□ -0
C9orf3-204ENST00000424143 SULT1C3Q6IMI6 304 aa15.05■□□□□ -0
C9orf3-204ENST00000424143 NCCRP1Q6ZVX7 275 aaPredicted RBP15.05■□□□□ -0
C9orf3-204ENST00000424143 R3HCC1LQ7Z5L2 792 aaKnown RBP15.05■□□□□ -0
C9orf3-204ENST00000424143 IFNEQ86WN2 208 aa15.05■□□□□ -0
C9orf3-204ENST00000424143 SPATA2LQ8IUW3 424 aaPredicted RBP15.05■□□□□ -0
C9orf3-204ENST00000424143 GLB1L3Q8NCI6 653 aaPredicted RBP15.05■□□□□ -0
C9orf3-204ENST00000424143 ABHD11Q8NFV4 315 aa15.05■□□□□ -0
C9orf3-204ENST00000424143 OR10T2Q8NGX3 314 aa15.05■□□□□ -0
C9orf3-204ENST00000424143 SH3YL1Q96HL8 342 aaPredicted RBP15.05■□□□□ -0
C9orf3-204ENST00000424143 C8orf48Q96LL4 319 aa15.05■□□□□ -0
C9orf3-204ENST00000424143 FBXO44Q9H4M3 255 aa15.05■□□□□ -0
C9orf3-204ENST00000424143 NMUR1Q9HB89 426 aa15.05■□□□□ -0
C9orf3-204ENST00000424143 ANKHQ9HCJ1 492 aa15.05■□□□□ -0
C9orf3-204ENST00000424143 INTS7Q9NVH2 962 aaKnown RBP15.05■□□□□ -0
C9orf3-204ENST00000424143 ASIC5Q9NY37 505 aa15.05■□□□□ -0
C9orf3-204ENST00000424143 NUDT4Q9NZJ9 180 aa15.05■□□□□ -0
C9orf3-204ENST00000424143 G3V2T6 193 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 TMX2-CTNND1H3BSU7 103 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 M0QZ92 97 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 PDHXO00330 501 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 INPPL1O15357 1258 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 MSI1O43347 362 aaKnown RBP15.04■□□□□ -0
C9orf3-204ENST00000424143 KPNA6O60684 536 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 UGT2B11O75310 529 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 RETP07949 1114 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 ITGAMP11215 1152 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 EEF1B2P24534 225 aaKnown RBP15.04■□□□□ -0
C9orf3-204ENST00000424143 ACVR2AP27037 513 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 ELK4P28324 431 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 CXCR4P61073 352 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms