RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 SRRM1Q8IYB3 904 aaKnown RBP16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 D2HGDHQ8N465 521 aa16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 TMEM102Q8N9M5 508 aaPredicted RBP16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 HSPH1Q92598 858 aa16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 CXorf40BQ96DE9 158 aa16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 ERGIC2Q96RQ1 377 aa16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 ZSCAN5AQ9BUG6 496 aa16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 SPATA16Q9BXB7 569 aa16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 PCDH18Q9HCL0 1135 aa16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 RBM22Q9NW64 420 aaKnown RBP eCLIP16.41■□□□□ 0.221e-7■■■■■ 41.1
CHCHD3-202ENST00000423635 MAP10Q9P2G4 905 aa16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 DNAJC16Q9Y2G8 782 aa16.41■□□□□ 0.22
CHCHD3-202ENST00000423635 FBN2P35556 2912 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 LRRC10BA6NIK2 292 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 KRT86O43790 486 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 VEGFDO43915 354 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 EBLN1P0CF75 366 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 GZMAP12544 262 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 TCF4P15884 667 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 FECHP22830 423 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 RIPPLY3P57055 190 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 DCDC1P59894 354 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 TUBB4BP68371 445 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 GALNT2Q10471 571 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 GPS2Q13227 327 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 TUBB2AQ13885 445 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 PLA2G4EQ3MJ16 856 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 TRAM1L1Q8N609 369 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 SLC38A9Q8NBW4 561 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 GPR26Q8NDV2 337 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 OR8K5Q8NH50 307 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 TEKT4Q8WW24 435 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 MR1Q95460 341 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 GLYATL1Q969I3 302 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 PHF12Q96QT6 1004 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 MAP3K3Q99759 626 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 TUBB2BQ9BVA1 445 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 HAUS2Q9NVX0 235 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 C5AR2Q9P296 337 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 NFKBIL1Q9UBC1 381 aaPredicted RBP16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 SRPK3Q9UPE1 567 aa16.4■□□□□ 0.22
CHCHD3-202ENST00000423635 LGALS16A8MUM7 142 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 ZNF185O15231 689 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 SCRG1O75711 98 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 FTLP02792 175 aaPredicted RBP16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 KLK3P07288 261 aaPredicted RBP16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 CCNCP24863 283 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 DRG2P55039 364 aaKnown RBP16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 ITGA1P56199 1179 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 HSD11B2P80365 405 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 PLEKHN1Q494U1 663 aaPredicted RBP16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 TXNRD3NBQ6F5E7 133 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 KLHL35Q6PF15 583 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 CERS6Q6ZMG9 384 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 C11orf96Q7Z7L8 435 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 IQCKQ8N0W5 287 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 ZNF501Q96CX3 271 aaPredicted RBP16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 TSGA13Q96PP4 275 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 RANBP9Q96S59 729 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 CD180Q99467 661 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 BARD1Q99728 777 aaKnown RBP16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 NUP85Q9BW27 656 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 NLNQ9BYT8 704 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 CHST8Q9H2A9 424 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 ZFYVE1Q9HBF4 777 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 MRPL47Q9HD33 250 aaKnown RBP16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 LATS2Q9NRM7 1088 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 RAD18Q9NS91 495 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 KCND1Q9NSA2 647 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 ASF1BQ9NVP2 202 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 FANCLQ9NW38 375 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 GPR83Q9NYM4 423 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 TMEM63CQ9P1W3 806 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 LIMA1Q9UHB6 759 aaKnown RBP16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 WDR37Q9Y2I8 494 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 SCINQ9Y6U3 715 aa16.39■□□□□ 0.21
CHCHD3-202ENST00000423635 OTOGQ6ZRI0 2925 aa16.38■□□□□ 0.21
CHCHD3-202ENST00000423635 KCNJ13O60928 360 aa16.38■□□□□ 0.21
CHCHD3-202ENST00000423635 CDK14O94921 469 aa16.38■□□□□ 0.21
CHCHD3-202ENST00000423635 MMP2P08253 660 aa16.38■□□□□ 0.21
CHCHD3-202ENST00000423635 VAV2P52735 878 aa16.38■□□□□ 0.21
CHCHD3-202ENST00000423635 GSDMDP57764 484 aa16.38■□□□□ 0.21
CHCHD3-202ENST00000423635 UBXN1Q04323 297 aa16.38■□□□□ 0.21
CHCHD3-202ENST00000423635 IFI16Q16666 785 aaKnown RBP16.38■□□□□ 0.21
CHCHD3-202ENST00000423635 CRB2Q5IJ48 1285 aa16.38■□□□□ 0.21
CHCHD3-202ENST00000423635 PLEKHS1Q5SXH7 462 aa16.38■□□□□ 0.21
CHCHD3-202ENST00000423635 TMC3Q7Z5M5 1100 aa16.38■□□□□ 0.21
CHCHD3-202ENST00000423635 FAM71BQ8TC56 605 aa16.38■□□□□ 0.21
CHCHD3-202ENST00000423635 TCFL5Q9UL49 500 aa16.38■□□□□ 0.21
CHCHD3-202ENST00000423635 MYO6Q9UM54 1294 aa16.38■□□□□ 0.21
CHCHD3-202ENST00000423635 SNX7Q9UNH6 387 aa16.38■□□□□ 0.21
CHCHD3-202ENST00000423635 ANKUB1A6NFN9 424 aa16.37■□□□□ 0.21
CHCHD3-202ENST00000423635 TLCD2A6NGC4 264 aa16.37■□□□□ 0.21
CHCHD3-202ENST00000423635 A6NL46 340 aa16.37■□□□□ 0.21
CHCHD3-202ENST00000423635 MEN1O00255 615 aa16.37■□□□□ 0.21
CHCHD3-202ENST00000423635 HLA-DQB2P05538 268 aa16.37■□□□□ 0.21
CHCHD3-202ENST00000423635 ARL4DP49703 201 aa16.37■□□□□ 0.21
CHCHD3-202ENST00000423635 RRADP55042 308 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms