RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 CCDC187A0A096LP49 1063 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 KLHL33A6NCF5 533 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 OR2AG2A6NM03 316 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 C3orf80F5H4A9 247 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 GAPDHSO14556 408 aaPredicted RBP10.77□□□□□ -0.69
USP49-204ENST00000423567 PPM1DO15297 605 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 GPR39O43194 453 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 BRINP1O60477 761 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 POP7O75817 140 aaKnown RBP10.77□□□□□ -0.69
USP49-204ENST00000423567 VIPP01282 170 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 MPOP05164 745 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 RPL22P35268 128 aaKnown RBP10.77□□□□□ -0.69
USP49-204ENST00000423567 HALP42357 657 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 KCNJ1P48048 391 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 GPLD1P80108 840 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 B4GALNT1Q00973 533 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 NR1D2Q14995 579 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 SEPT7Q16181 437 aaKnown RBP10.77□□□□□ -0.69
USP49-204ENST00000423567 ZRANB3Q5FWF4 1079 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 FNBP1LQ5T0N5 605 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 FOXR1Q6PIV2 292 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 NLRP9Q7RTR0 991 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 TAS2R42Q7RTR8 314 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 PRUNE1Q86TP1 453 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 ZNF547Q8IVP9 402 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 NXPE1Q8N323 547 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 RASGEF1AQ8N9B8 481 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.77□□□□□ -0.692e-6■■■■■ 54.9
USP49-204ENST00000423567 MAGOHBQ96A72 148 aaKnown RBP10.77□□□□□ -0.69
USP49-204ENST00000423567 LIN37Q96GY3 246 aaPredicted RBP10.77□□□□□ -0.69
USP49-204ENST00000423567 OSBPL9Q96SU4 736 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 COPS8Q99627 209 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 DPYSL5Q9BPU6 564 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 EIF2B3Q9NR50 452 aaKnown RBP10.77□□□□□ -0.69
USP49-204ENST00000423567 ATXN7L1Q9ULK2 861 aaPredicted RBP10.77□□□□□ -0.69
USP49-204ENST00000423567 TTC7AQ9ULT0 858 aaPredicted RBP10.77□□□□□ -0.69
USP49-204ENST00000423567 SATB2Q9UPW6 733 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 PTPRBP23467 1997 aa10.77□□□□□ -0.69
USP49-204ENST00000423567 A6NCN8 305 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 SRRM3A6NNA2 597 aaPredicted RBP10.76□□□□□ -0.69
USP49-204ENST00000423567 H7C0S8 307 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 SMAPO00193 183 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 CCL22O00626 93 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 RRP8O43159 456 aaKnown RBP10.76□□□□□ -0.69
USP49-204ENST00000423567 B4GAT1O43505 415 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 DUX1O43812 170 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 EML2O95834 649 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 ZSCAN5DPP0CG00 497 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 XRCC1P18887 633 aaPredicted RBP10.76□□□□□ -0.69
USP49-204ENST00000423567 ADRA1DP25100 572 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 RPL10P27635 214 aaKnown RBP10.76□□□□□ -0.69
USP49-204ENST00000423567 CCKBRP32239 447 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 PDX1P52945 283 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 CTSCP53634 463 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 SARNPP82979 210 aaKnown RBP10.76□□□□□ -0.69
USP49-204ENST00000423567 XIAPP98170 497 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 CACNG1Q06432 222 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 CCDC38Q502W7 563 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 PHF19Q5T6S3 580 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 AGAP9Q5VTM2 703 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 WASH2PQ6VEQ5 465 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 USP53Q70EK8 1073 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 DET1Q7L5Y6 550 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 RAB11FIP2Q7L804 512 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 FBXO39Q8N4B4 442 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 BEND7Q8N7W2 519 aaPredicted RBP10.76□□□□□ -0.69
USP49-204ENST00000423567 PRELID2Q8N945 189 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 GLIS1Q8NBF1 620 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 PPHLN1Q8NEY8 458 aaKnown RBP10.76□□□□□ -0.69
USP49-204ENST00000423567 TMEM159Q96B96 161 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 CXorf40BQ96DE9 158 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 SGF29Q96ES7 293 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 CDKN2AIPNLQ96HQ2 116 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 ZNF578Q96N58 590 aaPredicted RBP10.76□□□□□ -0.69
USP49-204ENST00000423567 RANBP9Q96S59 729 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 TTC1Q99614 292 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 CMKLR1Q99788 373 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 AP1M1Q9BXS5 423 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 FOXP3Q9BZS1 431 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 FAM96AQ9H5X1 160 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 VPS37BQ9H9H4 285 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 RDH14Q9HBH5 336 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 CASS4Q9NQ75 786 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 WASH6PQ9NQA3 447 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 THSD1Q9NS62 852 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 BFARQ9NZS9 450 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 CPNE7Q9UBL6 633 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 SLC23A2Q9UGH3 650 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 RAXQ9Y2V3 346 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 PCDHGA8Q9Y5G5 932 aa10.76□□□□□ -0.69
USP49-204ENST00000423567 KNTC1P50748 2209 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 IGHV1OR21-1A0A087WYE8 117 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 CCDC78A2IDD5 438 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 MGAT4DA6NG13 374 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 MROH6A6NGR9 719 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 AGAP14A8MT82 685 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 CES2O00748 559 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 PLD2O14939 933 aa10.75□□□□□ -0.69
USP49-204ENST00000423567 CASC3O15234 703 aaKnown RBP10.75□□□□□ -0.69
USP49-204ENST00000423567 DXOO77932 396 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms