RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 TBC1D3HP0C7X1 549 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 ATP1A3P13637 1013 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 MMP8P22894 467 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 PRKCHP24723 683 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 MASP1P48740 699 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 KLK7P49862 253 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 DNA2P51530 1060 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 SGSHP51688 502 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 PLK1P53350 603 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 GEMIN4P57678 1058 aaKnown RBP5.72□□□□□ -1.49
LINC00458-201ENST00000423442 NOMO3P69849 1222 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 SLC20A2Q08357 652 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 KLHL30Q0D2K2 578 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 HNRNPDQ14103 355 aaKnown RBP5.72□□□□□ -1.49
LINC00458-201ENST00000423442 ASIC2Q16515 512 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 CDO1Q16878 200 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 ERCC6LQ2NKX8 1250 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 HNRNPA1L2Q32P51 320 aaKnown RBP5.72□□□□□ -1.49
LINC00458-201ENST00000423442 C2CD6Q53TS8 623 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 SLC45A4Q5BKX6 768 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 FSCBQ5H9T9 825 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 PAPD7Q5XG87 772 aaKnown RBP5.72□□□□□ -1.49
LINC00458-201ENST00000423442 TMEM215Q68D42 235 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 TBC1D3GQ6DHY5 549 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 TBC1D3CQ6IPX1 549 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 ACAD10Q6JQN1 1059 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 RWDD4Q6NW29 188 aaKnown RBP5.72□□□□□ -1.49
LINC00458-201ENST00000423442 DNAJC24Q6P3W2 148 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 DRICH1Q6PGQ1 229 aaPredicted RBP5.72□□□□□ -1.49
LINC00458-201ENST00000423442 ZNF783Q6ZMS7 281 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 SLFN11Q7Z7L1 901 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 PHLDB2Q86SQ0 1253 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 MARCH9Q86YJ5 346 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 LURAP1LQ8IV03 231 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 DHX40Q8IX18 779 aaKnown RBP5.72□□□□□ -1.49
LINC00458-201ENST00000423442 TBC1D3Q8IZP1 549 aaPredicted RBP5.72□□□□□ -1.49
LINC00458-201ENST00000423442 APCDD1Q8J025 514 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 ZNF843Q8N446 348 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 ZNF366Q8N895 744 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 ATP11CQ8NB49 1132 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 SLC20A1Q8WUM9 679 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 CHTF18Q8WVB6 975 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 RXFP2Q8WXD0 754 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 OR8D1Q8WZ84 308 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 NT5C3BQ969T7 300 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 PGAP3Q96FM1 320 aaPredicted RBP5.72□□□□□ -1.49
LINC00458-201ENST00000423442 VCPIP1Q96JH7 1222 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 CFAP57Q96MR6 1250 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 TBCBQ99426 244 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 NCAPGQ9BPX3 1015 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 C11orf70Q9BRQ4 267 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 ZYG11BQ9C0D3 744 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 GANQ9H2C0 597 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 MS4A5Q9H3V2 200 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 SGK2Q9HBY8 427 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 MRPL47Q9HD33 250 aaKnown RBP5.72□□□□□ -1.49
LINC00458-201ENST00000423442 DYRK4Q9NR20 520 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 PIGVQ9NUD9 493 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 PARVAQ9NVD7 372 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 FBXL12Q9NXK8 326 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 WSB2Q9NYS7 404 aaPredicted RBP5.72□□□□□ -1.49
LINC00458-201ENST00000423442 TESQ9UGI8 421 aaKnown RBP5.72□□□□□ -1.49
LINC00458-201ENST00000423442 XPO7Q9UIA9 1087 aaKnown RBP5.72□□□□□ -1.49
LINC00458-201ENST00000423442 SLCO3A1Q9UIG8 710 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 NOCTQ9UK39 431 aaKnown RBP5.72□□□□□ -1.49
LINC00458-201ENST00000423442 AJAP1Q9UKB5 411 aaPredicted RBP5.72□□□□□ -1.49
LINC00458-201ENST00000423442 SIK3Q9Y2K2 1263 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 LUC7L2Q9Y383 392 aaKnown RBP5.72□□□□□ -1.49
LINC00458-201ENST00000423442 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.72□□□□□ -1.49
LINC00458-201ENST00000423442 DOCK4Q8N1I0 1966 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 APC2O95996 2303 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 ACACAQ13085 2346 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 CFAP46Q8IYW2 2715 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 URB1O60287 2271 aaKnown RBP5.72□□□□□ -1.49
LINC00458-201ENST00000423442 CKAP5Q14008 2032 aa5.71□□□□□ -1.5
LINC00458-201ENST00000423442 ILVBLA1L0T0 632 aa5.71□□□□□ -1.5
LINC00458-201ENST00000423442 PRSS38A1L453 326 aa5.71□□□□□ -1.5
LINC00458-201ENST00000423442 TRABD2BA6NFA1 517 aa5.71□□□□□ -1.5
LINC00458-201ENST00000423442 DRGXA6NNA5 263 aa5.71□□□□□ -1.5
LINC00458-201ENST00000423442 ZNF891A8MT65 544 aaPredicted RBP5.71□□□□□ -1.5
LINC00458-201ENST00000423442 KRTAP29-1A8MX34 341 aaPredicted RBP5.71□□□□□ -1.5
LINC00458-201ENST00000423442 TMCO5BA8MYB1 307 aa5.71□□□□□ -1.5
LINC00458-201ENST00000423442 TTC34A8MYJ7 566 aa5.71□□□□□ -1.5
LINC00458-201ENST00000423442 E9PAM4 449 aa5.71□□□□□ -1.5
LINC00458-201ENST00000423442 J3QKU1 62 aa5.71□□□□□ -1.5
LINC00458-201ENST00000423442 BCAT2O15382 392 aaPredicted RBP5.71□□□□□ -1.5
LINC00458-201ENST00000423442 TEX33O43247 280 aa5.71□□□□□ -1.5
LINC00458-201ENST00000423442 DFNA5O60443 496 aa5.71□□□□□ -1.5
LINC00458-201ENST00000423442 SEMA4FO95754 770 aa5.71□□□□□ -1.5
LINC00458-201ENST00000423442 IL1BP01584 269 aa5.71□□□□□ -1.5
LINC00458-201ENST00000423442 FTLP02792 175 aaPredicted RBP5.71□□□□□ -1.5
LINC00458-201ENST00000423442 RHOCP08134 193 aa5.71□□□□□ -1.5
LINC00458-201ENST00000423442 PLEKP08567 350 aaPredicted RBP5.71□□□□□ -1.5
LINC00458-201ENST00000423442 CLEC2LP0C7M8 214 aa5.71□□□□□ -1.5
LINC00458-201ENST00000423442 UNGP13051 313 aaPredicted RBP5.71□□□□□ -1.5
LINC00458-201ENST00000423442 CHRNB2P17787 502 aa5.71□□□□□ -1.5
LINC00458-201ENST00000423442 GPD1P21695 349 aa5.71□□□□□ -1.5
LINC00458-201ENST00000423442 C5AR1P21730 350 aa5.71□□□□□ -1.5
LINC00458-201ENST00000423442 XPAP23025 273 aaPredicted RBP5.71□□□□□ -1.5
LINC00458-201ENST00000423442 SLC8A1P32418 973 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms