RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 ADCK1Q86TW2 530 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 PIK3C3Q8NEB9 887 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 ESAMQ96AP7 390 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 ASB2Q96Q27 587 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 CYP2S1Q96SQ9 504 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 RMND5AQ9H871 391 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 FBXO8Q9NRD0 319 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 ATP11BQ9Y2G3 1177 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 NYNRINQ9P2P1 1898 aaKnown RBP16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 FAM47E-STBD1D6RA91 191 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 TULP3O75386 442 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 F9P00740 461 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 CST1P01037 141 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 CHRNA1P02708 482 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 ANXA6P08133 673 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 ZNF37AP17032 561 aaPredicted RBP16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 S100A1P23297 94 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 BRCA1P38398 1863 aaKnown RBP16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 CD86P42081 329 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 AGTR2P50052 363 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 IFITM2Q01629 132 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 HIST2H2ACQ16777 129 aaPredicted RBP16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 ATAD3BQ5T9A4 648 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 NOTUMQ6P988 496 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 SYVN1Q86TM6 617 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 ARRDC4Q8NCT1 418 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 PSMA8Q8TAA3 256 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 TSPEARQ8WU66 669 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 MAGEE1Q9HCI5 957 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 MPP6Q9NZW5 540 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 NAALAD2Q9Y3Q0 740 aa16.5■□□□□ 0.23
NPC1L1-203ENST00000423141 ENPP3O14638 875 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 HS6ST1O60243 411 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 HPRP00739 348 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 PRSS56P0CW18 603 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 SLC26A3P40879 764 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 PNPLA4P41247 253 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 DGKQP52824 942 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 YWHAHQ04917 246 aaPredicted RBP16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 ITKQ08881 620 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 SEMA3AQ14563 771 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 BEND5Q7L4P6 421 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 SPATA19Q7Z5L4 167 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 CLIP4Q8N3C7 705 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 TBATAQ96M53 351 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 HBEGFQ99075 208 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 RHNO1Q9BSD3 238 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 FEM1AQ9BSK4 669 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 BRINP2Q9C0B6 783 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 VTA1Q9NP79 307 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 ERVK-18Q9QC07 812 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 SUN2Q9UH99 717 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 LOC100130705A0A1B0GUX0 176 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 TTC34A8MYJ7 566 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 H3BRB1 525 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 GOT2P00505 430 aaKnown RBP16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 HMGB2P26583 209 aaKnown RBP16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 CD40LGP29965 261 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 CD6P30203 668 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 VGLL4Q14135 290 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 DGUOKQ16854 277 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 RAB41Q5JT25 222 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 PRR23BQ6ZRT6 265 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 TOP6BLQ8N6T0 577 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 PJA1Q8NG27 643 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 DYNC2LI1Q8TCX1 351 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 RPL3LQ92901 407 aaKnown RBP16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 KLHL5Q96PQ7 755 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 CGREF1Q99674 301 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 MFSD1Q9H3U5 465 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 SPC25Q9HBM1 224 aa16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 PNMA8BQ9ULN7 279 aaPredicted RBP16.49■□□□□ 0.23
NPC1L1-203ENST00000423141 DNAJC25-GNG10A0A024R161 153 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 HHLA1C9JL84 531 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 SLC7A4O43246 635 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 SNX2O60749 519 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 GGT1P19440 569 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 CCR1P32246 355 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 HNRNPFP52597 415 aaKnown RBP16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 KCTD2Q14681 263 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 FNDC5Q8NAU1 212 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 MCOLN3Q8TDD5 553 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 CAPSLQ8WWF8 208 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 TRIB2Q92519 343 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 EPS8L2Q9H6S3 715 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 NT5MQ9NPB1 228 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 ABCB10Q9NRK6 738 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 NEUROG3Q9Y4Z2 214 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 U3KQV3 271 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 CENPFP49454 3210 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 TYW5A2RUC4 315 aaKnown RBP16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 SLC22A1O15245 554 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 NDUFB5O43674 189 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 MGEA5O60502 916 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 GJB3O75712 270 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 FMO3P31513 532 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 ILF2Q12905 390 aaKnown RBP16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 XKR7Q5GH72 579 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 CCDC81Q6ZN84 652 aa16.48■□□□□ 0.23
NPC1L1-203ENST00000423141 PAGE2Q7Z2X7 111 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms