RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 GAS2L3Q86XJ1 694 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 DTX1Q86Y01 620 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 PLXDC1Q8IUK5 500 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 ZNF547Q8IVP9 402 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 ZNF843Q8N446 348 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 IL22RA1Q8N6P7 574 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 UBL4BQ8N7F7 174 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 RASGEF1AQ8N9B8 481 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 AVL9Q8NBF6 648 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 CCDC110Q8TBZ0 833 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 SNRNP27Q8WVK2 155 aaKnown RBP9.14□□□□□ -0.95
NUP50-206ENST00000422489 TTC9Q92623 222 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 NKD1Q969G9 470 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 RNF31Q96EP0 1072 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 WBP1Q96G27 269 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 TGM7Q96PF1 710 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 TIMM29Q9BSF4 260 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 GBA3Q9H227 469 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 PLSCR2Q9NRY7 297 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.14□□□□□ -0.95
NUP50-206ENST00000422489 PDP2Q9P2J9 529 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 PSMD13Q9UNM6 376 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 AAR2Q9Y312 384 aaKnown RBP9.14□□□□□ -0.95
NUP50-206ENST00000422489 REXO2Q9Y3B8 237 aaKnown RBP9.14□□□□□ -0.95
NUP50-206ENST00000422489 KCTD3Q9Y597 815 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 PCDHGA3Q9Y5H0 932 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 B3GALT1Q9Y5Z6 326 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 KNTC1P50748 2209 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 WDFY3Q8IZQ1 3526 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 ANKRD36A6QL64 1941 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 CACNA1GO43497 2377 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 ACACAQ13085 2346 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 GRID2IPA4D2P6 1211 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 GOLGA6L9A6NEM1 432 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 OR2AG2A6NM03 316 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 OR52A4PA6NMU1 304 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 BTNL10A8MVZ5 291 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 B4E171 279 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 CAPN5O15484 640 aaPredicted RBP9.13□□□□□ -0.95
NUP50-206ENST00000422489 PJA2O43164 708 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 GPR39O43194 453 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 RAD1O60671 282 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 RASSF9O75901 435 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 C1QL1O75973 258 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 BRAFP15056 766 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 LPOP22079 712 aaPredicted RBP9.13□□□□□ -0.95
NUP50-206ENST00000422489 PSMB4P28070 264 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 PBLDP30039 288 aaPredicted RBP9.13□□□□□ -0.95
NUP50-206ENST00000422489 AKT1P31749 480 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 CA5AP35218 305 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 TSPAN7P41732 249 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 SEPHS1P49903 392 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 VAV2P52735 878 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 EPHA4P54764 986 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 GFERP55789 205 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 UBE2IP63279 158 aaKnown RBP9.13□□□□□ -0.95
NUP50-206ENST00000422489 FOXM1Q08050 763 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 KIF5AQ12840 1032 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 OLIG2Q13516 323 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 GPRC6AQ5T6X5 926 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 CACNA2D3Q8IZS8 1091 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 OR4K2Q8NGD2 314 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 NAT14Q8WUY8 206 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 EXTL1Q92935 676 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 LRRC45Q96CN5 670 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 ELMO2Q96JJ3 720 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 DESI2Q9BSY9 194 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 DDA1Q9BW61 102 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 ZCCHC2Q9C0B9 1178 aaKnown RBP9.13□□□□□ -0.95
NUP50-206ENST00000422489 SEMA4CQ9C0C4 833 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 B3GNT4Q9C0J1 378 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 EPB41L1Q9H4G0 881 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 FAM96AQ9H5X1 160 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 ASB8Q9H765 288 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 APMAPQ9HDC9 416 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 FAM8A1Q9UBU6 413 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 PACSIN2Q9UNF0 486 aaPredicted RBP9.13□□□□□ -0.95
NUP50-206ENST00000422489 EFR3BQ9Y2G0 817 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 ARL5AQ9Y689 179 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 SLC30A1Q9Y6M5 507 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 ASXL3Q9C0F0 2248 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 IGSF10Q6WRI0 2623 aa9.13□□□□□ -0.95
NUP50-206ENST00000422489 C5orf60A6NFR6 353 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 LILRA5A6NI73 299 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 POLR1CO15160 346 aaPredicted RBP9.12□□□□□ -0.95
NUP50-206ENST00000422489 KIF1CO43896 1103 aaKnown RBP9.12□□□□□ -0.95
NUP50-206ENST00000422489 KCNJ13O60928 360 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 PPFIA2O75334 1257 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 CRTAMO95727 393 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 FTCDO95954 541 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 TPH1P17752 444 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 WT1P19544 449 aaPredicted RBP9.12□□□□□ -0.95
NUP50-206ENST00000422489 FECHP22830 423 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 PTPN7P35236 360 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 LEPRP48357 1165 aaKnown RBP9.12□□□□□ -0.95
NUP50-206ENST00000422489 ARSDP51689 593 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 CTSCP53634 463 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 RAB15P59190 212 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 NFE2L1Q14494 772 aa9.12□□□□□ -0.95
NUP50-206ENST00000422489 CLCA4Q14CN2 919 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms