RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 VPS35Q96QK1 796 aa16.55■□□□□ 0.24
UPF3AP3-201ENST00000420996 SRPK1Q96SB4 655 aaKnown RBP16.55■□□□□ 0.24
UPF3AP3-201ENST00000420996 BRD8Q9H0E9 1235 aa16.55■□□□□ 0.24
UPF3AP3-201ENST00000420996 CTTNBP2NLQ9P2B4 639 aa16.55■□□□□ 0.24
UPF3AP3-201ENST00000420996 UVRAGQ9P2Y5 699 aa16.55■□□□□ 0.24
UPF3AP3-201ENST00000420996 TMPRSS11EQ9UL52 423 aa16.55■□□□□ 0.24
UPF3AP3-201ENST00000420996 IGHV5-51A0A0C4DH38 117 aa16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 KCNJ13O60928 360 aa16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 TIAF1O95411 115 aa16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 SLC4A1P02730 911 aa16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 PDGFAP04085 211 aa16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 KDELR1P24390 212 aa16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 HALP42357 657 aa16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 ZBED6P86452 979 aa16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 AP1B1Q10567 949 aa16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 TMEM115Q12893 351 aaPredicted RBP16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 SLC14A2Q15849 920 aa16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 CCDC70Q6NSX1 233 aa16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 BPHLQ86WA6 291 aaPredicted RBP16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 SIDT2Q8NBJ9 832 aaKnown RBP16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 RAPGEF5Q92565 580 aa16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 UBXN4Q92575 508 aa16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 SLC41A2Q96JW4 573 aa16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 GPR87Q9BY21 358 aa16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 SLC25A51Q9H1U9 297 aa16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 ACTL8Q9H568 366 aa16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 TMEM63CQ9P1W3 806 aa16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 LCMT1Q9UIC8 334 aa16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 RARRES3Q9UL19 164 aa16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 WDR37Q9Y2I8 494 aa16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 HEY1Q9Y5J3 304 aa16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 TNRC6AQ8NDV7 1962 aaKnown RBP16.54■□□□□ 0.24
UPF3AP3-201ENST00000420996 ZNF487B1APH4 448 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 VPS4BO75351 444 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 FOLR1P15328 257 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 FECHP22830 423 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 PBX1P40424 430 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 TUBB3Q13509 450 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 PCSK7Q16549 785 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 FAM182AQ5T1J6 154 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 PWWP2BQ6NUJ5 590 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 KLHL35Q6PF15 583 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 TRAPPC5Q8IUR0 188 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 PLD5Q8N7P1 536 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 GALNT11Q8NCW6 608 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 BRSK1Q8TDC3 778 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 CPLX3Q8WVH0 158 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 THAP4Q8WY91 577 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 AGAP3Q96P47 875 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 TRIM55Q9BYV6 548 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 CEP41Q9BYV8 373 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 CBX8Q9HC52 389 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 TRIM10Q9UDY6 481 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 CAPN11Q9UMQ6 739 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 NENFQ9UMX5 172 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 VPS4AQ9UN37 437 aa16.53■□□□□ 0.24
UPF3AP3-201ENST00000420996 TTLL8A6PVC2 850 aa16.52■□□□□ 0.24
UPF3AP3-201ENST00000420996 DNAJB5O75953 348 aa16.52■□□□□ 0.24
UPF3AP3-201ENST00000420996 NDST3O95803 873 aa16.52■□□□□ 0.24
UPF3AP3-201ENST00000420996 H2AFZP0C0S5 128 aa16.52■□□□□ 0.24
UPF3AP3-201ENST00000420996 PTPN4P29074 926 aa16.52■□□□□ 0.24
UPF3AP3-201ENST00000420996 PPP1CAP62136 330 aa16.52■□□□□ 0.24
UPF3AP3-201ENST00000420996 ACY1Q03154 408 aa16.52■□□□□ 0.24
UPF3AP3-201ENST00000420996 GTF2H3Q13889 308 aa16.52■□□□□ 0.24
UPF3AP3-201ENST00000420996 IQCB1Q15051 598 aa16.52■□□□□ 0.24
UPF3AP3-201ENST00000420996 UGT8Q16880 541 aa16.52■□□□□ 0.24
UPF3AP3-201ENST00000420996 ATP13A5Q4VNC0 1218 aa16.52■□□□□ 0.24
UPF3AP3-201ENST00000420996 SLC9A4Q6AI14 798 aa16.52■□□□□ 0.24
UPF3AP3-201ENST00000420996 CAPRIN2Q6IMN6 1127 aaKnown RBP16.52■□□□□ 0.24
UPF3AP3-201ENST00000420996 H2AFVQ71UI9 128 aa16.52■□□□□ 0.24
UPF3AP3-201ENST00000420996 VSIG1Q86XK7 387 aa16.52■□□□□ 0.24
UPF3AP3-201ENST00000420996 KMT5CQ86Y97 462 aa16.52■□□□□ 0.24
UPF3AP3-201ENST00000420996 EFCAB3Q8N7B9 438 aa16.52■□□□□ 0.24
UPF3AP3-201ENST00000420996 GDAP1Q8TB36 358 aa16.52■□□□□ 0.24
UPF3AP3-201ENST00000420996 IQCDQ96DY2 449 aa16.52■□□□□ 0.24
UPF3AP3-201ENST00000420996 TTC25Q96NG3 672 aa16.52■□□□□ 0.24
UPF3AP3-201ENST00000420996 AKIRIN1Q9H9L7 192 aaPredicted RBP16.52■□□□□ 0.24
UPF3AP3-201ENST00000420996 BPIFA1Q9NP55 256 aa16.52■□□□□ 0.24
UPF3AP3-201ENST00000420996 USP9XQ93008 2570 aaPredicted RBP16.51■□□□□ 0.23
UPF3AP3-201ENST00000420996 AURKAO14965 403 aa16.51■□□□□ 0.23
UPF3AP3-201ENST00000420996 MT-CYBP00156 380 aaPredicted RBP16.51■□□□□ 0.23
UPF3AP3-201ENST00000420996 HMGCLP35914 325 aa16.51■□□□□ 0.23
UPF3AP3-201ENST00000420996 UQCRFS1P47985 274 aa16.51■□□□□ 0.23
UPF3AP3-201ENST00000420996 DMPKQ09013 629 aa16.51■□□□□ 0.23
UPF3AP3-201ENST00000420996 KCNAB1Q14722 419 aa16.51■□□□□ 0.23
UPF3AP3-201ENST00000420996 PDK1Q15118 436 aa16.51■□□□□ 0.23
UPF3AP3-201ENST00000420996 FHL5Q5TD97 284 aa16.51■□□□□ 0.23
UPF3AP3-201ENST00000420996 FAM199XQ6PEV8 388 aaPredicted RBP16.51■□□□□ 0.23
UPF3AP3-201ENST00000420996 SYVN1Q86TM6 617 aa16.51■□□□□ 0.23
UPF3AP3-201ENST00000420996 AMZ2Q86W34 360 aa16.51■□□□□ 0.23
UPF3AP3-201ENST00000420996 SPATA22Q8NHS9 363 aa16.51■□□□□ 0.23
UPF3AP3-201ENST00000420996 CPT1CQ8TCG5 803 aa16.51■□□□□ 0.23
UPF3AP3-201ENST00000420996 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.51■□□□□ 0.23
UPF3AP3-201ENST00000420996 CTNNBL1Q8WYA6 563 aaPredicted RBP16.51■□□□□ 0.23
UPF3AP3-201ENST00000420996 RUFY1Q96T51 708 aa16.51■□□□□ 0.23
UPF3AP3-201ENST00000420996 CD180Q99467 661 aa16.51■□□□□ 0.23
UPF3AP3-201ENST00000420996 GLOD4Q9HC38 313 aa16.51■□□□□ 0.23
UPF3AP3-201ENST00000420996 FGF21Q9NSA1 209 aa16.51■□□□□ 0.23
UPF3AP3-201ENST00000420996 LUC7L2Q9Y383 392 aaKnown RBP16.51■□□□□ 0.23
UPF3AP3-201ENST00000420996 PCDHGA9Q9Y5G4 932 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms