RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 PBXIP1Q96AQ6 731 aa8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 FAM136AQ96C01 138 aa8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 ASIC4Q96FT7 647 aa8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 KLHL32Q96NJ5 620 aa8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 ASB16Q96NS5 453 aa8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 NSUN5Q96P11 429 aaKnown RBP8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 CCT7Q99832 543 aa8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 CIPCQ9C0C6 399 aa8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 CD248Q9HCU0 757 aa8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 MID1IP1Q9NPA3 183 aa8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 SPATS2LQ9NUQ6 558 aaKnown RBP8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 DUS2Q9NX74 493 aaKnown RBP8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 NDE1Q9NXR1 346 aa8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 KCTD5Q9NXV2 234 aa8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 UTP6Q9NYH9 597 aaKnown RBP8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 NKX1-2Q9UD57 310 aaPredicted RBP8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 CDH22Q9UJ99 828 aa8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 TMPRSS11EQ9UL52 423 aa8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 YBX2Q9Y2T7 364 aaKnown RBP8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 OARD1Q9Y530 152 aa8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 TNPO3Q9Y5L0 923 aaKnown RBP8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 DNAJC15Q9Y5T4 150 aa8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 CHD9Q3L8U1 2897 aa8.94□□□□□ -0.98
LINCMD1-201ENST00000418518 CHD7Q9P2D1 2997 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 IQCF5A8MTL0 148 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 GRXCR1A8MXD5 290 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 TTC34A8MYJ7 566 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 PSMD11O00231 422 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 PER2O15055 1255 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 TRIM24O15164 1050 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 UBDO15205 165 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 RAD51BO15315 384 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 LEFTY1O75610 366 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 SLC25A14O95258 325 aaPredicted RBP8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 PSMG1O95456 288 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 MATN4O95460 622 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 CTSLP07711 333 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 UROSP10746 265 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 TIMP2P16035 220 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 UGT1A6P19224 532 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 UGT1A1P22309 533 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 UGT1A4P22310 534 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 FCARP24071 287 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 UGT1A3P35503 534 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 UGT1A5P35504 534 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 MMP12P39900 470 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 NNMTP40261 264 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 PSMD8P48556 350 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 AGTR2P50052 363 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 MTTPP55157 894 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 CDH13P55290 713 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 MXRA7P84157 204 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 CDKL1Q00532 357 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 RALGDSQ12967 914 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 CUL3Q13618 768 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 TTLL9Q3SXZ7 439 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 ACCSLQ4AC99 568 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 ATP13A5Q4VNC0 1218 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 KHDC1Q4VXA5 237 aaKnown RBP8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 ZNF805Q5CZA5 627 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 CMPK2Q5EBM0 449 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 TCEAL5Q5H9L2 206 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 FAM78AQ5JUQ0 283 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 HENMT1Q5T8I9 393 aaKnown RBP8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 C6orf163Q5TEZ5 329 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 NXNQ6DKJ4 435 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 CLEC6AQ6EIG7 209 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 C16orf89Q6UX73 402 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 HACD2Q6Y1H2 254 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 TMEM184AQ6ZMB5 413 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 RIPOR1Q6ZS17 1223 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 C12orf40Q86WS4 652 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 PGAM4Q8N0Y7 254 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 MYO1HQ8N1T3 1032 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 KYQ8NBH2 561 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 BPIFB1Q8TDL5 484 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 TRPC4APQ8TEL6 797 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 JADE3Q92613 823 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 C3orf30Q96M34 536 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 PANX3Q96QZ0 392 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 COPS8Q99627 209 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 THTPAQ9BU02 230 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 FAM126AQ9BYI3 521 aaPredicted RBP8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 TUBB1Q9H4B7 451 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 PIDD1Q9HB75 910 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 TMEM45AQ9NWC5 275 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 GDE1Q9NZC3 331 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 CD274Q9NZQ7 290 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 STX18Q9P2W9 335 aaKnown RBP8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 IL36AQ9UHA7 158 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 ZNF225Q9UK10 706 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 PTBP2Q9UKA9 531 aaKnown RBP8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 SARDHQ9UL12 918 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 SLC8A2Q9UPR5 921 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 FNDC3AQ9Y2H6 1198 aaKnown RBP8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 L3MBTL1Q9Y468 752 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 CEP290O15078 2479 aa8.93□□□□□ -0.98
LINCMD1-201ENST00000418518 TRANK1O15050 2925 aa8.92□□□□□ -0.98
LINCMD1-201ENST00000418518 A0A1B0GTL3 188 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms