RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 PTPRBP23467 1997 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 SCN8AQ9UQD0 1980 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 TRBV5-4A0A0C4DH59 114 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 EFCAB8A8MWE9 144 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 B4DGG1 531 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 AVILO75366 819 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 GOT2P00505 430 aaKnown RBP13.15□□□□□ -0.3
TMEM248-203ENST00000418375 PAMP19021 973 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 ACRV1P26436 265 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 CA5AP35218 305 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 CLCNKAP51800 687 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 TARDBPQ13148 414 aaKnown RBP eCLIP13.15□□□□□ -0.3
TMEM248-203ENST00000418375 MORF4L2Q15014 288 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 LYPLAL1Q5VWZ2 237 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 OGFOD3Q6PK18 319 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 TMEM220Q6QAJ8 160 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 SERPINA9Q86WD7 417 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 SLC35F3Q8IY50 421 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 RASGEF1AQ8N9B8 481 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 OR6C4Q8NGE1 309 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 ZDHHC1Q8WTX9 485 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 NAT6Q93015 286 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 NXPE2Q96DL1 559 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 SNF8Q96H20 258 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 ZNF778Q96MU6 729 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 TIMM29Q9BSF4 260 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 TREX1Q9NSU2 369 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 SPATS2LQ9NUQ6 558 aaKnown RBP13.15□□□□□ -0.3
TMEM248-203ENST00000418375 ANAPC5Q9UJX4 755 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 PADI4Q9UM07 663 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 KCNK6Q9Y257 313 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 PLEKHM1Q9Y4G2 1056 aa13.15□□□□□ -0.3
TMEM248-203ENST00000418375 PCYT1BQ9Y5K3 369 aaPredicted RBP13.15□□□□□ -0.3
TMEM248-203ENST00000418375 DNMT3AQ9Y6K1 912 aaPredicted RBP13.15□□□□□ -0.3
TMEM248-203ENST00000418375 LAMA5O15230 3695 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 LY6G6EA0A0G2JKS1 128 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 CPED1A4D0V7 1026 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 EME2A4GXA9 379 aaPredicted RBP13.14□□□□□ -0.31
TMEM248-203ENST00000418375 OR51F1A6NGY5 319 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 KCNJ13O60928 360 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 GP1BAP07359 652 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 MYF5P13349 255 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 SLC2A4P14672 509 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 ZNF7P17097 686 aaPredicted RBP13.14□□□□□ -0.31
TMEM248-203ENST00000418375 IVDP26440 423 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 NMBRP28336 390 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 FOXN2P32314 431 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 PPARGP37231 505 aaPredicted RBP13.14□□□□□ -0.31
TMEM248-203ENST00000418375 MAGEA3P43357 314 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 CDKN1CP49918 316 aaPredicted RBP13.14□□□□□ -0.31
TMEM248-203ENST00000418375 E2F1Q01094 437 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 BIRC2Q13490 618 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 ITIH4Q14624 930 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 COL28A1Q2UY09 1125 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 PLA2G4EQ3MJ16 856 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 C14orf28Q4W4Y0 310 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 FASTKD1Q53R41 847 aaKnown RBP13.14□□□□□ -0.31
TMEM248-203ENST00000418375 DNAJC21Q5F1R6 531 aaKnown RBP13.14□□□□□ -0.31
TMEM248-203ENST00000418375 AARS2Q5JTZ9 985 aaKnown RBP13.14□□□□□ -0.31
TMEM248-203ENST00000418375 CERS6Q6ZMG9 384 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 DET1Q7L5Y6 550 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 ZNF547Q8IVP9 402 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 PIANPQ8IYJ0 282 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 KYQ8NBH2 561 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 BBOF1Q8ND07 529 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 MNS1Q8NEH6 495 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 GPR156Q8NFN8 814 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 OR4L1Q8NH43 312 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 HNRNPLLQ8WVV9 542 aaKnown RBP13.14□□□□□ -0.31
TMEM248-203ENST00000418375 SGSM3Q96HU1 749 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 TRIM31Q9BZY9 425 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 OSGEPL1Q9H4B0 414 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 KLC4Q9NSK0 619 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 ST14Q9Y5Y6 855 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 MAD1L1Q9Y6D9 718 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 U3KQA8 63 aa13.14□□□□□ -0.31
TMEM248-203ENST00000418375 LRP4O75096 1905 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 IGLV3-16A0A075B6K0 115 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 KLHL33A6NCF5 533 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 OR2AG2A6NM03 316 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 F8W8V4 182 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 RAD51CO43502 376 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 NOBOXO60393 691 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 POP7O75817 140 aaKnown RBP13.13□□□□□ -0.31
TMEM248-203ENST00000418375 SEC31AO94979 1220 aaKnown RBP13.13□□□□□ -0.31
TMEM248-203ENST00000418375 ATP1B2P14415 290 aaPredicted RBP13.13□□□□□ -0.31
TMEM248-203ENST00000418375 CTSCP53634 463 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 DBN1Q16643 649 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 BCL7AQ4VC05 210 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 FNBP1LQ5T0N5 605 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 HIBCHQ6NVY1 386 aaPredicted RBP13.13□□□□□ -0.31
TMEM248-203ENST00000418375 GUSBP11Q6P575 273 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 EFL1Q7Z2Z2 1120 aaKnown RBP13.13□□□□□ -0.31
TMEM248-203ENST00000418375 AMZ2Q86W34 360 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 MPP5Q8N3R9 675 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 IFI44Q8TCB0 444 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 MFSD3Q96ES6 412 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 SGF29Q96ES7 293 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 ERP44Q9BS26 406 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 RAB17Q9H0T7 212 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms