RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 LRRC14BA6NHZ5 514 aa16.75■□□□□ 0.27
CALD1-204ENST00000417172 MTHFD2P13995 350 aa16.75■□□□□ 0.27
CALD1-204ENST00000417172 ATP1B2P14415 290 aaPredicted RBP16.75■□□□□ 0.27
CALD1-204ENST00000417172 ATP5F1P24539 256 aaPredicted RBP16.75■□□□□ 0.27
CALD1-204ENST00000417172 CCR7P32248 378 aa16.75■□□□□ 0.27
CALD1-204ENST00000417172 SKIV2L2P42285 1042 aaKnown RBP16.75■□□□□ 0.27
CALD1-204ENST00000417172 RAET1GQ6H3X3 334 aa16.75■□□□□ 0.27
CALD1-204ENST00000417172 Q6ZS52 159 aa16.75■□□□□ 0.27
CALD1-204ENST00000417172 CYP2U1Q7Z449 544 aa16.75■□□□□ 0.27
CALD1-204ENST00000417172 NRSN1Q8IZ57 195 aa16.75■□□□□ 0.27
CALD1-204ENST00000417172 NKAPQ8N5F7 415 aaKnown RBP16.75■□□□□ 0.27
CALD1-204ENST00000417172 DDHD1Q8NEL9 900 aa16.75■□□□□ 0.27
CALD1-204ENST00000417172 KLK6Q92876 244 aa16.75■□□□□ 0.27
CALD1-204ENST00000417172 KIAA1191Q96A73 305 aa16.75■□□□□ 0.27
CALD1-204ENST00000417172 RAB7BQ96AH8 199 aa16.75■□□□□ 0.27
CALD1-204ENST00000417172 GRAMD1AQ96CP6 724 aa16.75■□□□□ 0.27
CALD1-204ENST00000417172 RAD18Q9NS91 495 aa16.75■□□□□ 0.27
CALD1-204ENST00000417172 PNPOQ9NVS9 261 aa16.75■□□□□ 0.27
CALD1-204ENST00000417172 NCKIPSDQ9NZQ3 722 aa16.75■□□□□ 0.27
CALD1-204ENST00000417172 FAM8A1Q9UBU6 413 aa16.75■□□□□ 0.27
CALD1-204ENST00000417172 DNAJC16Q9Y2G8 782 aa16.75■□□□□ 0.27
CALD1-204ENST00000417172 NCF1BA6NI72 391 aaPredicted RBP16.74■□□□□ 0.27
CALD1-204ENST00000417172 NCF1CA8MVU1 366 aaPredicted RBP16.74■□□□□ 0.27
CALD1-204ENST00000417172 NCF1P14598 390 aaPredicted RBP16.74■□□□□ 0.27
CALD1-204ENST00000417172 CTSCP53634 463 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 IFT88Q13099 833 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 UGT3A1Q6NUS8 523 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 ZBTB2Q8N680 514 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 INPP5DQ92835 1189 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 DCUN1D1Q96GG9 259 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 OSBPL6Q9BZF3 934 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 CDH19Q9H159 772 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 TFB2MQ9H5Q4 396 aaKnown RBP16.74■□□□□ 0.27
CALD1-204ENST00000417172 KCNK13Q9HB14 408 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 RNF112Q9ULX5 631 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 CA14Q9ULX7 337 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 ZFR2Q9UPR6 939 aaKnown RBP16.74■□□□□ 0.27
CALD1-204ENST00000417172 A0A0G2JND7 137 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 TMEM202A6NGA9 273 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 EBAG9O00559 213 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 IPO13O94829 963 aaKnown RBP16.74■□□□□ 0.27
CALD1-204ENST00000417172 MSH3P20585 1137 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 GRK2P25098 689 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 TMEM31Q5JXX7 168 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 TRIM67Q6ZTA4 783 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 FAM124AQ86V42 546 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 CRLF3Q8IUI8 442 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 ZNF781Q8N8C0 355 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 RASGEF1AQ8N9B8 481 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 FLCNQ8NFG4 579 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 VPS35Q96QK1 796 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 TRIM55Q9BYV6 548 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 SLC2A4RGQ9NR83 387 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 UTP6Q9NYH9 597 aaKnown RBP16.74■□□□□ 0.27
CALD1-204ENST00000417172 KLHL14Q9P2G3 628 aa16.74■□□□□ 0.27
CALD1-204ENST00000417172 SUPT3HB4E1H0 165 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 SUPT3HO75486 399 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 SIX3O95343 332 aaPredicted RBP16.73■□□□□ 0.27
CALD1-204ENST00000417172 HSPA4LO95757 839 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 DNTTP04053 509 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 PCCBP05166 539 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 OR56A5P0C7T3 313 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 TROVE2P10155 538 aaKnown RBP eCLIP16.73■□□□□ 0.27
CALD1-204ENST00000417172 TSPAN8P19075 237 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 MPSTP25325 297 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 GPR1P46091 355 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 HK3P52790 923 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 PRKAA2P54646 552 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 ATP6V0D1P61421 351 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 MRPS21P82921 87 aaKnown RBP16.73■□□□□ 0.27
CALD1-204ENST00000417172 CREB5Q02930 508 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 DMTNQ08495 405 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 FGL2Q14314 439 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 PFKFB4Q16877 469 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 HSF5Q4G112 596 aaPredicted RBP16.73■□□□□ 0.27
CALD1-204ENST00000417172 C6orf89Q6UWU4 347 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 VRK3Q8IV63 474 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 LSMEM2Q8N112 164 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 OR14C36Q8NHC7 312 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 DTX3LQ8TDB6 740 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 SPATS2LQ9NUQ6 558 aaKnown RBP16.73■□□□□ 0.27
CALD1-204ENST00000417172 ABCF3Q9NUQ8 709 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 ADAMTS6Q9UKP5 1117 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 ARL2BPQ9Y2Y0 163 aa16.73■□□□□ 0.27
CALD1-204ENST00000417172 LOC730098B7Z3J9 87 aa16.72■□□□□ 0.27
CALD1-204ENST00000417172 KERAO60938 352 aa16.72■□□□□ 0.27
CALD1-204ENST00000417172 BOP1Q14137 746 aaKnown RBP16.72■□□□□ 0.27
CALD1-204ENST00000417172 RCN2Q14257 317 aa16.72■□□□□ 0.27
CALD1-204ENST00000417172 E2F5Q15329 346 aa16.72■□□□□ 0.27
CALD1-204ENST00000417172 ARL13AQ5H913 290 aaPredicted RBP16.72■□□□□ 0.27
CALD1-204ENST00000417172 PTGR2Q8N8N7 351 aaPredicted RBP16.72■□□□□ 0.27
CALD1-204ENST00000417172 ANKS4BQ8N8V4 417 aa16.72■□□□□ 0.27
CALD1-204ENST00000417172 RHEBL1Q8TAI7 183 aa16.72■□□□□ 0.27
CALD1-204ENST00000417172 KCNV2Q8TDN2 545 aa16.72■□□□□ 0.27
CALD1-204ENST00000417172 MRGPRX1Q96LB2 322 aa16.72■□□□□ 0.27
CALD1-204ENST00000417172 LENG8Q96PV6 779 aaPredicted RBP16.72■□□□□ 0.27
CALD1-204ENST00000417172 TSPAN6O43657 245 aa16.72■□□□□ 0.27
CALD1-204ENST00000417172 AP1G1O43747 822 aa16.72■□□□□ 0.27
CALD1-204ENST00000417172 TM7SF2O76062 418 aa16.72■□□□□ 0.27
CALD1-204ENST00000417172 NDUFV2P19404 249 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms