RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 UGT1A8Q9HAW9 530 aa9.48□□□□□ -0.89
LINC01090-201ENST00000415357 RDH14Q9HBH5 336 aa9.48□□□□□ -0.89
LINC01090-201ENST00000415357 TRIM39Q9HCM9 518 aa9.48□□□□□ -0.89
LINC01090-201ENST00000415357 IL26Q9NPH9 171 aa9.48□□□□□ -0.89
LINC01090-201ENST00000415357 RAD18Q9NS91 495 aa9.48□□□□□ -0.89
LINC01090-201ENST00000415357 HACD3Q9P035 362 aa9.48□□□□□ -0.89
LINC01090-201ENST00000415357 IL17CQ9P0M4 197 aa9.48□□□□□ -0.89
LINC01090-201ENST00000415357 TBC1D29Q9UFV1 150 aa9.48□□□□□ -0.89
LINC01090-201ENST00000415357 SLC23A2Q9UGH3 650 aa9.48□□□□□ -0.89
LINC01090-201ENST00000415357 KCTD3Q9Y597 815 aa9.48□□□□□ -0.89
LINC01090-201ENST00000415357 ARL5AQ9Y689 179 aa9.48□□□□□ -0.89
LINC01090-201ENST00000415357 KNTC1P50748 2209 aa9.48□□□□□ -0.89
LINC01090-201ENST00000415357 CHD6Q8TD26 2715 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 LOC400499M0QZD8 3231 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 C5orf60A6NFR6 353 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 GAPDHSO14556 408 aaPredicted RBP9.47□□□□□ -0.89
LINC01090-201ENST00000415357 B4GAT1O43505 415 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 CCDC175P0C221 793 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 PNLIPP16233 465 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 ITPKBP27987 946 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 LSSP48449 732 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 INHBCP55103 352 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 LRP8Q14114 963 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 TBC1D25Q3MII6 688 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 MAP9Q49MG5 647 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 NKAIN2Q5VXU1 208 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 PDPK2PQ6A1A2 396 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 DENND5AQ6IQ26 1287 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 RANBP10Q6VN20 620 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 ARHGEF18Q6ZSZ5 1173 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 USP53Q70EK8 1073 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 ZNF438Q7Z4V0 828 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 PRUNE1Q86TP1 453 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 SLC13A5Q86YT5 568 aaPredicted RBP9.47□□□□□ -0.89
LINC01090-201ENST00000415357 ZNF547Q8IVP9 402 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 OR13C4Q8NGS5 318 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 GDAP1Q8TB36 358 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 NAT14Q8WUY8 206 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 C1orf54Q8WWF1 131 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 ZNF837Q96EG3 531 aaPredicted RBP9.47□□□□□ -0.89
LINC01090-201ENST00000415357 PRR11Q96HE9 360 aaPredicted RBP9.47□□□□□ -0.89
LINC01090-201ENST00000415357 NAF1Q96HR8 494 aaKnown RBP9.47□□□□□ -0.89
LINC01090-201ENST00000415357 VPS35Q96QK1 796 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 TBL1YQ9BQ87 522 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 NUDT22Q9BRQ3 303 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 OSGEPL1Q9H4B0 414 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 RMI1Q9H9A7 625 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 ASCL3Q9NQ33 180 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 PRDM8Q9NQV8 689 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 KLC4Q9NSK0 619 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 PIH1D1Q9NWS0 290 aaKnown RBP9.47□□□□□ -0.89
LINC01090-201ENST00000415357 DNAJC16Q9Y2G8 782 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 PKP3Q9Y446 797 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 ACACAQ13085 2346 aa9.47□□□□□ -0.89
LINC01090-201ENST00000415357 KIF26BQ2KJY2 2108 aa9.46□□□□□ -0.89
LINC01090-201ENST00000415357 A0A087WV48 116 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 CCDC187A0A096LP49 1063 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 GLYATL1P3A0A0U1RQE8 302 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 A6NCN8 305 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 CCL22O00626 93 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 CHUKO15111 745 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 STX7O15400 261 aaKnown RBP9.46□□□□□ -0.9
LINC01090-201ENST00000415357 CDK14O94921 469 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 CSF2RBP32927 897 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 ACTN2P35609 894 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 EIF2S3P41091 472 aaKnown RBP9.46□□□□□ -0.9
LINC01090-201ENST00000415357 CTSCP53634 463 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 TMPRSS15P98073 1019 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 CCDC173Q0VFZ6 552 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 MSLNQ13421 630 aaPredicted RBP9.46□□□□□ -0.9
LINC01090-201ENST00000415357 NFATC2Q13469 925 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 SNX1Q13596 522 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 PEX6Q13608 980 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 NR1D2Q14995 579 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 RPS6KA1Q15418 735 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 OASLQ15646 514 aaKnown RBP9.46□□□□□ -0.9
LINC01090-201ENST00000415357 SEPT7Q16181 437 aaKnown RBP9.46□□□□□ -0.9
LINC01090-201ENST00000415357 DBN1Q16643 649 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 KCTD19Q17RG1 926 aaPredicted RBP9.46□□□□□ -0.9
LINC01090-201ENST00000415357 INSCQ1MX18 579 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 PHF19Q5T6S3 580 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 GPRC6AQ5T6X5 926 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 MEI1Q5TIA1 1274 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 KCTD11Q693B1 232 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 LRRTM4Q86VH4 590 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 TRAPPC5Q8IUR0 188 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 SLITRK4Q8IW52 837 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 KLHDC8BQ8IXV7 354 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 SFRP1Q8N474 314 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 OR4K2Q8NGD2 314 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 WDR36Q8NI36 951 aaKnown RBP9.46□□□□□ -0.9
LINC01090-201ENST00000415357 FGF11Q92914 225 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 LIN37Q96GY3 246 aaPredicted RBP9.46□□□□□ -0.9
LINC01090-201ENST00000415357 SEMA6CQ9H3T2 930 aa9.46□□□□□ -0.9
LINC01090-201ENST00000415357 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.46□□□□□ -0.9
LINC01090-201ENST00000415357 AAR2Q9Y312 384 aaKnown RBP9.46□□□□□ -0.9
LINC01090-201ENST00000415357 ZFC3H1O60293 1989 aaKnown RBP9.46□□□□□ -0.9
LINC01090-201ENST00000415357 ZNF106Q9H2Y7 1883 aaKnown RBP9.45□□□□□ -0.9
LINC01090-201ENST00000415357 IGHV1OR21-1A0A087WYE8 117 aa9.45□□□□□ -0.9
LINC01090-201ENST00000415357 PLD2O14939 933 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms