RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 HSDL2Q6YN16 418 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 TDRPQ86YL5 185 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 UROC1Q96N76 676 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 ERGIC2Q96RQ1 377 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 AIFM2Q9BRQ8 373 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 SLC39A8Q9C0K1 460 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 COMMD4Q9H0A8 199 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 A6NCN8 305 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 BROXQ5VW32 411 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 PLCZ1Q86YW0 608 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 TCEANCQ8N8B7 351 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 CLEC12AQ5QGZ9 265 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 ATXN7L2Q5T6C5 722 aaPredicted RBP18.32■□□□□ 0.52
SHANK3-202ENST00000414786 SCLYQ96I15 445 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 ZFP3Q96NJ6 502 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 GDAP2Q9NXN4 497 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 HSPA7P48741 367 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 IDNKQ5T6J7 187 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 TTLL10Q6ZVT0 673 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 USP50Q70EL3 339 aaPredicted RBP18.32■□□□□ 0.52
SHANK3-202ENST00000414786 CMTR2Q8IYT2 770 aaKnown RBP18.32■□□□□ 0.52
SHANK3-202ENST00000414786 FAM46DQ8NEK8 389 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 TLX3O43711 291 aaPredicted RBP18.32■□□□□ 0.52
SHANK3-202ENST00000414786 CPNE3O75131 537 aaKnown RBP18.32■□□□□ 0.52
SHANK3-202ENST00000414786 JMJD7P0C870 316 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 LHCGRP22888 699 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 ATP13A5Q4VNC0 1218 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 SPPL2CQ8IUH8 684 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 MREGQ8N565 214 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 HPF1Q9NWY4 346 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 GOLGA4Q13439 2230 aaKnown RBP18.32■□□□□ 0.52
SHANK3-202ENST00000414786 TSPAN4O14817 238 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 OR3A3P47888 321 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 OR3A2P47893 321 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 CDK16Q00536 496 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 GANABQ14697 944 aaKnown RBP18.32■□□□□ 0.52
SHANK3-202ENST00000414786 TMPRSS11AQ6ZMR5 421 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 CMC1Q7Z7K0 106 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 NCSTNQ92542 709 aa18.32■□□□□ 0.52
SHANK3-202ENST00000414786 GPN1Q9HCN4 374 aaPredicted RBP18.32■□□□□ 0.52
SHANK3-202ENST00000414786 C9J4A7 227 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 SLC35G6P0C7Q6 338 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 CD247P20963 164 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 AGXTP21549 392 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 ADSSP30520 456 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 GDI1P31150 447 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 PSME3P61289 254 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 TREML2Q5T2D2 321 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 IFT27Q9BW83 186 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 NARSO43776 548 aaKnown RBP18.31■□□□□ 0.52
SHANK3-202ENST00000414786 MSCO60682 206 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 NR2F6P10588 404 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 HSD17B2P37059 387 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 MCL1Q07820 350 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 SMARCB1Q12824 385 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 TRMT2AQ8IZ69 625 aaKnown RBP18.31■□□□□ 0.52
SHANK3-202ENST00000414786 ZNF557Q8N988 423 aaPredicted RBP18.31■□□□□ 0.52
SHANK3-202ENST00000414786 ZNF570Q96NI8 536 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 ZNF639Q9UID6 485 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 HCN2Q9UL51 889 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 TTC24A2A3L6 582 aaPredicted RBP18.31■□□□□ 0.52
SHANK3-202ENST00000414786 WASHC1A8K0Z3 465 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 WASH3PC4AMC7 463 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 HSPA12AO43301 675 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 NFATC1O95644 943 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 COX4I1P13073 169 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 TIGD2Q4W5G0 525 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 SLC25A25Q6KCM7 469 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 GALNT18Q6P9A2 607 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 WASH2PQ6VEQ5 465 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 RBCK1Q9BYM8 510 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 PRDM12Q9H4Q4 367 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 FBXL3Q9UKT7 428 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 TESMINQ9Y4I5 508 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 KCNS2Q9ULS6 477 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 RWDD3Q9Y3V2 267 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 PLOD2O00469 737 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 ITGB3BPQ13352 177 aaPredicted RBP18.31■□□□□ 0.52
SHANK3-202ENST00000414786 GPR68Q15743 365 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 TMEM145Q8NBT3 493 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 CLP1Q92989 425 aaKnown RBP18.31■□□□□ 0.52
SHANK3-202ENST00000414786 AGO3Q9H9G7 860 aaKnown RBP18.31■□□□□ 0.52
SHANK3-202ENST00000414786 BLOC1S4Q9NUP1 217 aa18.31■□□□□ 0.52
SHANK3-202ENST00000414786 A0A0A0MRY4 1105 aa18.3■□□□□ 0.52
SHANK3-202ENST00000414786 CARNS1A5YM72 827 aa18.3■□□□□ 0.52
SHANK3-202ENST00000414786 GRXCR1A8MXD5 290 aa18.3■□□□□ 0.52
SHANK3-202ENST00000414786 IL7RP16871 459 aa18.3■□□□□ 0.52
SHANK3-202ENST00000414786 TKTP29401 623 aaKnown RBP18.3■□□□□ 0.52
SHANK3-202ENST00000414786 CSTF2P33240 577 aaKnown RBP eCLIP18.3■□□□□ 0.52
SHANK3-202ENST00000414786 MAP2K5Q13163 448 aa18.3■□□□□ 0.52
SHANK3-202ENST00000414786 SLC9B1Q4ZJI4 515 aa18.3■□□□□ 0.52
SHANK3-202ENST00000414786 DCLRE1AQ6PJP8 1040 aa18.3■□□□□ 0.52
SHANK3-202ENST00000414786 AP3S1Q92572 193 aa18.3■□□□□ 0.52
SHANK3-202ENST00000414786 SPATA13Q96N96 652 aa18.3■□□□□ 0.52
SHANK3-202ENST00000414786 FTHL17Q9BXU8 183 aa18.3■□□□□ 0.52
SHANK3-202ENST00000414786 ASB7Q9H672 318 aa18.3■□□□□ 0.52
SHANK3-202ENST00000414786 SPAG4Q9NPE6 437 aa18.3■□□□□ 0.52
SHANK3-202ENST00000414786 MAGEA2P43356 314 aa18.3■□□□□ 0.52
SHANK3-202ENST00000414786 NFKB2Q00653 900 aa18.3■□□□□ 0.52
SHANK3-202ENST00000414786 ZNF234Q14588 700 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms