RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 MAML1Q92585 1016 aa13.42□□□□□ -0.26
RAPGEF1-204ENST00000414781 APOOQ9BUR5 198 aa13.42□□□□□ -0.26
RAPGEF1-204ENST00000414781 UNKQ9C0B0 810 aaKnown RBP13.42□□□□□ -0.26
RAPGEF1-204ENST00000414781 PAK5Q9P286 719 aa13.42□□□□□ -0.26
RAPGEF1-204ENST00000414781 HECAQ9UBI9 543 aaPredicted RBP13.42□□□□□ -0.26
RAPGEF1-204ENST00000414781 UTP11Q9Y3A2 253 aaKnown RBP13.42□□□□□ -0.26
RAPGEF1-204ENST00000414781 PCDHGA9Q9Y5G4 932 aaKnown RBP13.42□□□□□ -0.26
RAPGEF1-204ENST00000414781 J3KR12 359 aa13.41□□□□□ -0.26
RAPGEF1-204ENST00000414781 DLGAP3O95886 979 aa13.41□□□□□ -0.26
RAPGEF1-204ENST00000414781 JCHAINP01591 159 aa13.41□□□□□ -0.26
RAPGEF1-204ENST00000414781 KRT14P02533 472 aa13.41□□□□□ -0.26
RAPGEF1-204ENST00000414781 TIMP2P16035 220 aa13.41□□□□□ -0.26
RAPGEF1-204ENST00000414781 KELP23276 732 aa13.41□□□□□ -0.26
RAPGEF1-204ENST00000414781 LBRQ14739 615 aaKnown RBP13.41□□□□□ -0.26
RAPGEF1-204ENST00000414781 TTC27Q6P3X3 843 aa13.41□□□□□ -0.26
RAPGEF1-204ENST00000414781 ARHGEF18Q6ZSZ5 1173 aa13.41□□□□□ -0.26
RAPGEF1-204ENST00000414781 PID1Q7Z2X4 250 aa13.41□□□□□ -0.26
RAPGEF1-204ENST00000414781 SFTPA2Q8IWL1 248 aa13.41□□□□□ -0.26
RAPGEF1-204ENST00000414781 BBOF1Q8ND07 529 aa13.41□□□□□ -0.26
RAPGEF1-204ENST00000414781 ISG20Q96AZ6 181 aaKnown RBP13.41□□□□□ -0.26
RAPGEF1-204ENST00000414781 LRRC45Q96CN5 670 aa13.41□□□□□ -0.26
RAPGEF1-204ENST00000414781 SPATA13Q96N96 652 aa13.41□□□□□ -0.26
RAPGEF1-204ENST00000414781 PCDH9Q9HC56 1237 aa13.41□□□□□ -0.26
RAPGEF1-204ENST00000414781 MRPL40Q9NQ50 206 aaKnown RBP13.41□□□□□ -0.26
RAPGEF1-204ENST00000414781 FBXO8Q9NRD0 319 aa13.41□□□□□ -0.26
RAPGEF1-204ENST00000414781 RBM22Q9NW64 420 aaKnown RBP eCLIP13.41□□□□□ -0.269e-6■□□□□ 9.6
RAPGEF1-204ENST00000414781 KLHL8Q9P2G9 620 aaPredicted RBP13.41□□□□□ -0.26
RAPGEF1-204ENST00000414781 KCND3Q9UK17 655 aa13.41□□□□□ -0.26
RAPGEF1-204ENST00000414781 PCDHGB7Q9Y5F8 929 aa13.41□□□□□ -0.26
RAPGEF1-204ENST00000414781 MRPS18BQ9Y676 258 aaKnown RBP13.41□□□□□ -0.26
RAPGEF1-204ENST00000414781 ZNF106Q9H2Y7 1883 aaKnown RBP13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 GOLGA6CA6NDK9 693 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 GOLGA6BA6NDN3 693 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 KCNK1O00180 336 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 TNFRSF10CO14798 259 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 ZMPSTE24O75844 475 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 TUBBP07437 444 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 GOLGA6DP0CG33 693 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 DLSTP36957 453 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 PTGIRP43119 386 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 MMP13P45452 471 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 SUOXP51687 545 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 MAZP56270 477 aaKnown RBP13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 KIAA1024LP59773 190 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 MTM1Q13496 603 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 SEMA5AQ13591 1074 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 ERV3-1Q14264 604 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 PRPSAP1Q14558 356 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 ZNF235Q14590 738 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 INPP5AQ14642 412 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 PARP6Q2NL67 630 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 WSCD2Q2TBF2 565 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 TMEM71Q6P5X7 295 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 PCGF5Q86SE9 256 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 TTC7BQ86TV6 843 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 HPS6Q86YV9 775 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 RYBPQ8N488 228 aaPredicted RBP13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 TEX26Q8N6G2 289 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 NETO2Q8NC67 525 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 OR56A4Q8NGH8 313 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 OR1E3Q8WZA6 343 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 TEKT5Q96M29 485 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 SLC25A23Q9BV35 468 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 CINPQ9BW66 212 aaPredicted RBP13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 ZMYND15Q9H091 742 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 PDFQ9HBH1 243 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 SLAMF7Q9NQ25 335 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 GOLGA6AQ9NYA3 693 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 MAP10Q9P2G4 905 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 PDP2Q9P2J9 529 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 OR1A2Q9Y585 309 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 AKAP9Q99996 3911 aa13.4□□□□□ -0.26
RAPGEF1-204ENST00000414781 IGHV1OR21-1A0A087WYE8 117 aa13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 A0A1B0GTL3 188 aa13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 CDC14CA4D256 554 aa13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 CACNB4O00305 520 aaPredicted RBP13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 TTI1O43156 1089 aa13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 PSMD3O43242 534 aa13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 UGT2B4P06133 528 aa13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 PTPN3P26045 913 aa13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 CSF2RBP32927 897 aa13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 FDFT1P37268 417 aa13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 ADCY8P40145 1251 aa13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 DRG2P55039 364 aaKnown RBP13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 PER3P56645 1201 aa13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 GPLD1P80108 840 aa13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 ARF5P84085 180 aa13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 NSUN2Q08J23 767 aaKnown RBP eCLIP13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 WASHC5Q12768 1159 aa13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 PEX6Q13608 980 aa13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 PTK6Q13882 451 aa13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 PRR30Q53SZ7 412 aaPredicted RBP13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 RALGPS1Q5JS13 557 aa13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 ANKRD20A2Q5SQ80 823 aa13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 ANKRD20A1Q5TYW2 823 aa13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 ANKRD20A3Q5VUR7 823 aa13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 ARHGAP36Q6ZRI8 547 aa13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 LYSMD3Q7Z3D4 306 aa13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 NOA1Q8NC60 698 aaKnown RBP13.39□□□□□ -0.27
RAPGEF1-204ENST00000414781 ZDHHC1Q8WTX9 485 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms