RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 GCH1P30793 250 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 TTKP33981 857 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 BMI1P35226 326 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 FDFT1P37268 417 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 HSPA13P48723 471 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 PDE1BQ01064 536 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 GPS1Q13098 491 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 HIF1AQ16665 826 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 TYSND1Q2T9J0 566 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 USP41Q3LFD5 358 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 PDCD4Q53EL6 469 aaKnown RBP9.32□□□□□ -0.92
SNHG3-201ENST00000413987 C2CD6Q53TS8 623 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 RNASEH2BQ5TBB1 312 aaKnown RBP9.32□□□□□ -0.92
SNHG3-201ENST00000413987 LPCAT4Q643R3 524 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 ERI1Q8IV48 349 aaKnown RBP9.32□□□□□ -0.92
SNHG3-201ENST00000413987 HUS1BQ8NHY5 278 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 ZFP28Q8NHY6 868 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 SLC26A7Q8TE54 656 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 TRPC4APQ8TEL6 797 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 RMDN1Q96DB5 314 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 ABHD17AQ96GS6 310 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 HPDLQ96IR7 371 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 CLPTM1LQ96KA5 538 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 HEMGNQ9BXL5 484 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 MS4A5Q9H3V2 200 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 ASB7Q9H672 318 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 WDR26Q9H7D7 661 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 PLGRKTQ9HBL7 147 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 ZNHIT2Q9UHR6 403 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 KCNMB2Q9Y691 235 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 CEP290O15078 2479 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 UNC80Q8N2C7 3258 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 B4GALT3O60512 393 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 ENO2P09104 434 aaPredicted RBP9.32□□□□□ -0.92
SNHG3-201ENST00000413987 KCNC1P48547 511 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 GPX6P59796 221 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 PLOD1Q02809 727 aaPredicted RBP9.32□□□□□ -0.92
SNHG3-201ENST00000413987 TRAP1Q12931 704 aaKnown RBP9.32□□□□□ -0.92
SNHG3-201ENST00000413987 FASTKD3Q14CZ7 662 aaKnown RBP9.32□□□□□ -0.92
SNHG3-201ENST00000413987 PROX2Q3B8N5 592 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 COL13A1Q5TAT6 717 aaPredicted RBP9.32□□□□□ -0.92
SNHG3-201ENST00000413987 OGFRL1Q5TC84 451 aaPredicted RBP9.32□□□□□ -0.92
SNHG3-201ENST00000413987 GTF2IRD2BQ6EKJ0 949 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 GRAMD4Q6IC98 578 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 LRRC8BQ6P9F7 803 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 KLHL35Q6PF15 583 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 Q6ZNX1 250 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 TRIM67Q6ZTA4 783 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 PATL1Q86TB9 770 aaKnown RBP9.32□□□□□ -0.92
SNHG3-201ENST00000413987 GTF2IRD2Q86UP8 949 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 FAM217AQ8IXS0 508 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 RCOR2Q8IZ40 523 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 RTL3Q8N8U3 475 aaKnown RBP9.32□□□□□ -0.92
SNHG3-201ENST00000413987 DCAKDQ8WVC6 231 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 PYDC1Q8WXC3 89 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 APBB2Q92870 758 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 VCPIP1Q96JH7 1222 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 BIRC8Q96P09 236 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 TWNKQ96RR1 684 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 KCNJ15Q99712 375 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 LPIN3Q9BQK8 851 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 HAUS8Q9BT25 410 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 IMPG2Q9BZV3 1241 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 MOCS1Q9NZB8 636 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 TRPM5Q9NZQ8 1165 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 ADAMTS6Q9UKP5 1117 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 RPH3AQ9Y2J0 694 aaPredicted RBP9.32□□□□□ -0.92
SNHG3-201ENST00000413987 PCDHB4Q9Y5E5 795 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 PCDHGA5Q9Y5G8 931 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 RALGAPA2Q2PPJ7 1873 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 SH3PXD2BA1X283 911 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 CD3EAPO15446 510 aaKnown RBP9.31□□□□□ -0.92
SNHG3-201ENST00000413987 CYTIPO60759 359 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 OXCT1P55809 520 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 GCNT1Q02742 428 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 GALNT2Q10471 571 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 ZBTB6Q15916 424 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 LRRC36Q1X8D7 754 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 PRAMEF14Q5SWL7 426 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 ATG14Q6ZNE5 492 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 C3orf62Q6ZUJ4 267 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 STK32CQ86UX6 486 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 OSTM1Q86WC4 334 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 CRLF3Q8IUI8 442 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 HDAC10Q969S8 669 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 PCDH9Q9HC56 1237 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 CISHQ9NSE2 258 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 SOHLH2Q9NX45 425 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 GMIPQ9P107 970 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 APPL1Q9UKG1 709 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 COQ6Q9Y2Z9 468 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 NME7Q9Y5B8 376 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 GPR45Q9Y5Y3 372 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 A0A0U1RQF3 1178 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 KANSL1LA0AUZ9 987 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 URADA6NGE7 173 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 CACNG3O60359 315 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 CD48P09326 243 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 MYL4P12829 197 aa9.31□□□□□ -0.92
SNHG3-201ENST00000413987 NFKBIAP25963 317 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms