RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	SHB	Q15464	509 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	TYSND1	Q2T9J0	566 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	UAP1L1	Q3KQV9	507 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	HSP90AA5P	Q58FG0	334 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	KCTD16	Q68DU8	428 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	TMEM220	Q6QAJ8	160 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	CAPN12	Q6ZSI9	719 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	DET1	Q7L5Y6	550 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	GKN2	Q86XP6	184 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	CILP2	Q8IUL8	1156 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	RELL1	Q8IUW5	271 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	KIAA2013	Q8IYS2	634 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	BOC	Q9BWV1	1114 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	CLPB	Q9H078	707 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	TMEM168	Q9H0V1	697 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	ANKZF1	Q9H8Y5	726 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	VPS37B	Q9H9H4	285 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	IARS2	Q9NSE4	1012 aa	Known RBP	12.98	□□□□□ -0.33
SF1-206	ENST00000413725	INTS10	Q9NVR2	710 aa	Known RBP	12.98	□□□□□ -0.33
SF1-206	ENST00000413725	GPR34	Q9UPC5	381 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	CSNK1G3	Q9Y6M4	447 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	UNC13C	Q8NB66	2214 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	ASXL3	Q9C0F0	2248 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	12.97	□□□□□ -0.33
SF1-206	ENST00000413725	UBA6	A0AVT1	1052 aa	Predicted RBP	12.97	□□□□□ -0.33
SF1-206	ENST00000413725	KLHL33	A6NCF5	533 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	OR2AG2	A6NM03	316 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	C4orf47	A7E2U8	309 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	PRMT5	O14744	637 aa	Predicted RBP	12.97	□□□□□ -0.33
SF1-206	ENST00000413725	FUCA1	P04066	466 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	ANXA6	P08133	673 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	ALPPL2	P10696	532 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	ACP5	P13686	325 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	MCM3	P25205	808 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	SSTR1	P30872	391 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	STX2	P32856	288 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	PRLHR	P49683	370 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	LIMK1	P53667	647 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	ARHGAP8	P85298	464 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	MGAT5	Q09328	741 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	BNIP3	Q12983	259 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	C1orf61	Q13536	156 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	INSC	Q1MX18	579 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	BCL7A	Q4VC05	210 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	STPG1	Q5TH74	334 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	ZNF449	Q6P9G9	518 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	C3orf62	Q6ZUJ4	267 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	CHST15	Q7LFX5	561 aa	Predicted RBP	12.97	□□□□□ -0.33
SF1-206	ENST00000413725	TAF8	Q7Z7C8	310 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	LDB1	Q86U70	411 aa	Predicted RBP	12.97	□□□□□ -0.33
SF1-206	ENST00000413725	LRRC6	Q86X45	466 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	UNC5B	Q8IZJ1	945 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	SAP25	Q8TEE9	199 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	12.97	□□□□□ -0.33
SF1-206	ENST00000413725	CDKL2	Q92772	493 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	SGF29	Q96ES7	293 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	TIMM29	Q9BSF4	260 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	TSSK1B	Q9BXA7	367 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	PLAC1	Q9HBJ0	212 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	ZFAT	Q9P243	1243 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	12.97	□□□□□ -0.33
SF1-206	ENST00000413725	GNPTG	Q9UJJ9	305 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	FBXO5	Q9UKT4	447 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	SSUH2	Q9Y2M2	353 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	PRKAB1	Q9Y478	270 aa		12.97	□□□□□ -0.33
SF1-206	ENST00000413725	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	12.97	□□□□□ -0.33
SF1-206	ENST00000413725		V9GYY5	206 aa	Predicted RBP	12.97	□□□□□ -0.33
SF1-206	ENST00000413725	DNAH14	Q0VDD8	3507 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	LMO7DN	F2Z398	122 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	FFAR2	O15552	330 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	FLRT2	O43155	660 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	GDF9	O60383	454 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	OR1I1	O60431	355 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	KCNJ13	O60928	360 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	FTH1	P02794	183 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	GSTM1	P09488	218 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	OR56A5	P0C7T3	313 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	PBLD	P30039	288 aa	Predicted RBP	12.96	□□□□□ -0.33
SF1-206	ENST00000413725	PHB	P35232	272 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	SLC1A2	P43004	574 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	GRK6	P43250	576 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	CTSC	P53634	463 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	EIF3B	P55884	814 aa	Known RBP	12.96	□□□□□ -0.33
SF1-206	ENST00000413725	CTBS	Q01459	385 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	GSTM4	Q03013	218 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	CTBP1	Q13363	440 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	TCEA2	Q15560	299 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	ERCC6L	Q2NKX8	1250 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	PLA2G4E	Q3MJ16	856 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	TRMT10B	Q6PF06	316 aa	Known RBP	12.96	□□□□□ -0.33
SF1-206	ENST00000413725	LVRN	Q6Q4G3	990 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	KIAA0408	Q6ZU52	694 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	KANSL1	Q7Z3B3	1105 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	AMZ2	Q86W34	360 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	GATAD2A	Q86YP4	633 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	ZNF547	Q8IVP9	402 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	DENND6A	Q8IWF6	608 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	CNTN4	Q8IWV2	1026 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	NETO1	Q8TDF5	533 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	GPBAR1	Q8TDU6	330 aa		12.96	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms