RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 HCN4Q9Y3Q4 1203 aa15.01□□□□□ -0.01
LSM5-207ENST00000410044 PCDH15Q96QU1 1955 aa15.01□□□□□ -0.01
LSM5-207ENST00000410044 KMOO15229 486 aa15□□□□□ -0.01
LSM5-207ENST00000410044 GRID2O43424 1007 aa15□□□□□ -0.01
LSM5-207ENST00000410044 LRP3O75074 770 aa15□□□□□ -0.01
LSM5-207ENST00000410044 PIAS1O75925 651 aa15□□□□□ -0.01
LSM5-207ENST00000410044 RASGRP1O95267 797 aa15□□□□□ -0.01
LSM5-207ENST00000410044 LMNAP02545 664 aaKnown RBP15□□□□□ -0.01
LSM5-207ENST00000410044 OR56A5P0C7T3 313 aa15□□□□□ -0.01
LSM5-207ENST00000410044 ZNF806P0C7X5 589 aa15□□□□□ -0.01
LSM5-207ENST00000410044 PKMP14618 531 aaKnown RBP15□□□□□ -0.01
LSM5-207ENST00000410044 NME1P15531 152 aaKnown RBP15□□□□□ -0.01
LSM5-207ENST00000410044 CLCNKAP51800 687 aa15□□□□□ -0.01
LSM5-207ENST00000410044 HK3P52790 923 aa15□□□□□ -0.01
LSM5-207ENST00000410044 CTSCP53634 463 aa15□□□□□ -0.01
LSM5-207ENST00000410044 RASA2Q15283 850 aa15□□□□□ -0.01
LSM5-207ENST00000410044 CTSL3PQ5NE16 218 aa15□□□□□ -0.01
LSM5-207ENST00000410044 KCTD16Q68DU8 428 aa15□□□□□ -0.01
LSM5-207ENST00000410044 ZNF549Q6P9A3 640 aa15□□□□□ -0.01
LSM5-207ENST00000410044 DOK6Q6PKX4 331 aa15□□□□□ -0.01
LSM5-207ENST00000410044 ADGRD1Q6QNK2 874 aa15□□□□□ -0.01
LSM5-207ENST00000410044 IL27RAQ6UWB1 636 aa15□□□□□ -0.01
LSM5-207ENST00000410044 LAYNQ6UX15 382 aa15□□□□□ -0.01
LSM5-207ENST00000410044 LRRTM4Q86VH4 590 aa15□□□□□ -0.01
LSM5-207ENST00000410044 CTAGE3PQ8IX95 158 aa15□□□□□ -0.01
LSM5-207ENST00000410044 IQCKQ8N0W5 287 aa15□□□□□ -0.01
LSM5-207ENST00000410044 CLDN19Q8N6F1 224 aa15□□□□□ -0.01
LSM5-207ENST00000410044 TSACCQ96A04 125 aaPredicted RBP15□□□□□ -0.01
LSM5-207ENST00000410044 RBBP8Q99708 897 aa15□□□□□ -0.01
LSM5-207ENST00000410044 RHOJQ9H4E5 214 aa15□□□□□ -0.01
LSM5-207ENST00000410044 MRPL40Q9NQ50 206 aaKnown RBP15□□□□□ -0.01
LSM5-207ENST00000410044 KLF15Q9UIH9 416 aa15□□□□□ -0.01
LSM5-207ENST00000410044 GNPTGQ9UJJ9 305 aa15□□□□□ -0.01
LSM5-207ENST00000410044 PCYT1BQ9Y5K3 369 aaPredicted RBP15□□□□□ -0.01
LSM5-207ENST00000410044 SNX11Q9Y5W9 270 aa15□□□□□ -0.01
LSM5-207ENST00000410044 WDFY4Q6ZS81 3184 aa15□□□□□ -0.01
LSM5-207ENST00000410044 KNL1Q8NG31 2342 aa15□□□□□ -0.01
LSM5-207ENST00000410044 TMEM131Q92545 1883 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 TDRD6O60522 2096 aaKnown RBP14.99□□□□□ -0.01
LSM5-207ENST00000410044 PRR19A6NJB7 356 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 PATE3B3GLJ2 98 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 ARHGAP33O14559 1287 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 SYPP08247 313 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 GCAP28676 217 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 FMO4P31512 558 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 SPRP35270 261 aaPredicted RBP14.99□□□□□ -0.01
LSM5-207ENST00000410044 IRX4P78413 519 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 DMPKQ09013 629 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 EFTUD2Q15029 972 aaKnown RBP eCLIP14.99□□□□□ -0.012e-6■■■■■ 33.5
LSM5-207ENST00000410044 ZNF658BQ4V348 819 aaPredicted RBP14.99□□□□□ -0.01
LSM5-207ENST00000410044 TRIM61Q5EBN2 209 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 TDRPQ86YL5 185 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 PHACTR4Q8IZ21 702 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 SDR16C5Q8N3Y7 309 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 UHMK1Q8TAS1 419 aaKnown RBP14.99□□□□□ -0.01
LSM5-207ENST00000410044 PDXPQ96GD0 296 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 ELF4Q99607 663 aaPredicted RBP14.99□□□□□ -0.01
LSM5-207ENST00000410044 TIMM29Q9BSF4 260 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 CCM2Q9BSQ5 444 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 AARSD1Q9BTE6 412 aaKnown RBP14.99□□□□□ -0.01
LSM5-207ENST00000410044 TMEM109Q9BVC6 243 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 NUSAP1Q9BXS6 441 aaKnown RBP14.99□□□□□ -0.01
LSM5-207ENST00000410044 ROPN1BQ9BZX4 212 aaPredicted RBP14.99□□□□□ -0.01
LSM5-207ENST00000410044 ROPN1Q9HAT0 212 aaPredicted RBP14.99□□□□□ -0.01
LSM5-207ENST00000410044 CYP4F12Q9HCS2 524 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 ARGLU1Q9NWB6 273 aaPredicted RBP14.99□□□□□ -0.01
LSM5-207ENST00000410044 TXNDC16Q9P2K2 825 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 KLHL42Q9P2K6 505 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 GULP1Q9UBP9 304 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 ZNHIT2Q9UHR6 403 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 SLC24A2Q9UI40 661 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 GMEB2Q9UKD1 530 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 MED16Q9Y2X0 877 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 ADAMTS9Q9P2N4 1935 aa14.99□□□□□ -0.01
LSM5-207ENST00000410044 ZFC3H1O60293 1989 aaKnown RBP14.98□□□□□ -0.01
LSM5-207ENST00000410044 UQCRHLA0A096LP55 91 aa14.98□□□□□ -0.01
LSM5-207ENST00000410044 EXOC1LA0A1B0GW35 172 aa14.98□□□□□ -0.01
LSM5-207ENST00000410044 UBA6A0AVT1 1052 aaPredicted RBP14.98□□□□□ -0.01
LSM5-207ENST00000410044 MGAT4DA6NG13 374 aa14.98□□□□□ -0.01
LSM5-207ENST00000410044 OR2AG2A6NM03 316 aa14.98□□□□□ -0.01
LSM5-207ENST00000410044 KHNYNO15037 678 aaKnown RBP14.98□□□□□ -0.01
LSM5-207ENST00000410044 POP7O75817 140 aaKnown RBP14.98□□□□□ -0.01
LSM5-207ENST00000410044 FTH1P02794 183 aa14.98□□□□□ -0.01
LSM5-207ENST00000410044 SHBGP04278 402 aa14.98□□□□□ -0.01
LSM5-207ENST00000410044 CFIP05156 583 aa14.98□□□□□ -0.01
LSM5-207ENST00000410044 UQCRHP07919 91 aa14.98□□□□□ -0.01
LSM5-207ENST00000410044 JUNDP17535 347 aa14.98□□□□□ -0.01
LSM5-207ENST00000410044 MSH2P43246 934 aa14.98□□□□□ -0.01
LSM5-207ENST00000410044 SERPINB9P50453 376 aa14.98□□□□□ -0.01
LSM5-207ENST00000410044 LIMK2P53671 638 aa14.98□□□□□ -0.01
LSM5-207ENST00000410044 EIF3BP55884 814 aaKnown RBP14.98□□□□□ -0.01
LSM5-207ENST00000410044 HNRNPKP61978 463 aaKnown RBP eCLIP14.98□□□□□ -0.01
LSM5-207ENST00000410044 TIAL1Q01085 375 aaKnown RBP eCLIP14.98□□□□□ -0.01
LSM5-207ENST00000410044 GRIK2Q13002 908 aa14.98□□□□□ -0.01
LSM5-207ENST00000410044 LRP8Q14114 963 aa14.98□□□□□ -0.01
LSM5-207ENST00000410044 DET1Q7L5Y6 550 aa14.98□□□□□ -0.01
LSM5-207ENST00000410044 GALNT13Q8IUC8 556 aa14.98□□□□□ -0.01
LSM5-207ENST00000410044 HID1Q8IV36 788 aa14.98□□□□□ -0.01
LSM5-207ENST00000410044 OR2L2Q8NH16 312 aa14.98□□□□□ -0.01
LSM5-207ENST00000410044 GPBAR1Q8TDU6 330 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms