RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 OR4L1Q8NH43 312 aa10.74□□□□□ -0.69
CHMP3-205ENST00000409810 HDAC10Q969S8 669 aa10.74□□□□□ -0.69
CHMP3-205ENST00000409810 SGSM3Q96HU1 749 aa10.74□□□□□ -0.69
CHMP3-205ENST00000409810 FAM96AQ9H5X1 160 aa10.74□□□□□ -0.69
CHMP3-205ENST00000409810 SYNDIG1Q9H7V2 258 aa10.74□□□□□ -0.69
CHMP3-205ENST00000409810 SYBUQ9NX95 663 aa10.74□□□□□ -0.69
CHMP3-205ENST00000409810 LRIT1Q9P2V4 623 aa10.74□□□□□ -0.69
CHMP3-205ENST00000409810 KLK13Q9UKR3 277 aa10.74□□□□□ -0.69
CHMP3-205ENST00000409810 SOX13Q9UN79 622 aa10.74□□□□□ -0.69
CHMP3-205ENST00000409810 WASF3Q9UPY6 502 aa10.74□□□□□ -0.69
CHMP3-205ENST00000409810 DNAJC16Q9Y2G8 782 aa10.74□□□□□ -0.69
CHMP3-205ENST00000409810 MSRB2Q9Y3D2 182 aa10.74□□□□□ -0.69
CHMP3-205ENST00000409810 ST14Q9Y5Y6 855 aa10.74□□□□□ -0.69
CHMP3-205ENST00000409810 MAGEB16A2A368 324 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 CCDC162PA2VCL2 907 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 FAM221BA6H8Z2 402 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 PDZK1P1A8MUH7 402 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 POP7O75817 140 aaKnown RBP10.73□□□□□ -0.69
CHMP3-205ENST00000409810 AP2A2O94973 939 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 TOP3BO95985 862 aaKnown RBP10.73□□□□□ -0.69
CHMP3-205ENST00000409810 MT-CO3P00414 261 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 GOT2P00505 430 aaKnown RBP10.73□□□□□ -0.69
CHMP3-205ENST00000409810 GSTM1P09488 218 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 SPINK2P20155 84 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 FOXN2P32314 431 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 HALP42357 657 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 GPR3P46089 330 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 ARSDP51689 593 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 CTSCP53634 463 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 CRADDP78560 199 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 GSTM4Q03013 218 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 DMPKQ09013 629 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 PERM1Q5SV97 790 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 FNBP1LQ5T0N5 605 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 RNASEH2BQ5TBB1 312 aaKnown RBP10.73□□□□□ -0.69
CHMP3-205ENST00000409810 ANKRD22Q5VYY1 191 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 ZNF449Q6P9G9 518 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 WASH2PQ6VEQ5 465 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 PACS1Q6VY07 963 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 CERS6Q6ZMG9 384 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 RBM44Q6ZP01 1051 aaKnown RBP10.73□□□□□ -0.69
CHMP3-205ENST00000409810 C11orf96Q7Z7L8 435 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 JAMLQ86YT9 394 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 CCNJLQ8IV13 435 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 SFRP1Q8N474 314 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 BEND7Q8N7W2 519 aaPredicted RBP10.73□□□□□ -0.69
CHMP3-205ENST00000409810 NAT8LQ8N9F0 302 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 SLC37A2Q8TED4 501 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 SH3KBP1Q96B97 665 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 GRAMD1AQ96CP6 724 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 LINC00615Q96LM1 132 aaPredicted RBP10.73□□□□□ -0.69
CHMP3-205ENST00000409810 SERPINB12Q96P63 405 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 KIFC1Q9BW19 673 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 LRRN3Q9H3W5 708 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 SARS2Q9NP81 518 aaKnown RBP10.73□□□□□ -0.69
CHMP3-205ENST00000409810 WASH6PQ9NQA3 447 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 CHRAC1Q9NRG0 131 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 TREX1Q9NSU2 369 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 CATSPERZQ9NTU4 200 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 TBC1D29Q9UFV1 150 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 SLC2A6Q9UGQ3 507 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 RNF215Q9Y6U7 377 aa10.73□□□□□ -0.69
CHMP3-205ENST00000409810 TPRP12270 2363 aaKnown RBP10.73□□□□□ -0.69
CHMP3-205ENST00000409810 IGLV3-16A0A075B6K0 115 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 A6NCN8 305 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 MGAT4DA6NG13 374 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 OR51F1A6NGY5 319 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 SDR42E2A6NKP2 422 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 TMX2-CTNND1H3BSU7 103 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 GOLGA8MH3BSY2 632 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 PFDN6O15212 129 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 VIPP01282 170 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 RPLP0P05388 317 aaKnown RBP10.72□□□□□ -0.69
CHMP3-205ENST00000409810 PBLDP30039 288 aaPredicted RBP10.72□□□□□ -0.69
CHMP3-205ENST00000409810 CA5AP35218 305 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 PTGIRP43119 386 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 TTPAP49638 278 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 HHEXQ03014 270 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 NR1D2Q14995 579 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 MORF4L2Q15014 288 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 SEPT7Q16181 437 aaKnown RBP10.72□□□□□ -0.69
CHMP3-205ENST00000409810 DBN1Q16643 649 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 CLPPQ16740 277 aaPredicted RBP10.72□□□□□ -0.69
CHMP3-205ENST00000409810 DNAJC21Q5F1R6 531 aaKnown RBP10.72□□□□□ -0.69
CHMP3-205ENST00000409810 AGAP9Q5VTM2 703 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 CDCP2Q5VXM1 449 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 IZUMO3Q5VZ72 239 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 IYDQ6PHW0 289 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 ABRAXAS1Q6UWZ7 409 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 CCNI2Q6ZMN8 369 aaPredicted RBP10.72□□□□□ -0.69
CHMP3-205ENST00000409810 MAATS1Q7Z4T9 603 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 ZNF438Q7Z4V0 828 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 SPRED1Q7Z699 444 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 TRIM48Q8IWZ4 208 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 MPP5Q8N3R9 675 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 OTUD6BQ8N6M0 293 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 BBOF1Q8ND07 529 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 SPATA4Q8NEY3 305 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 OR2L2Q8NH16 312 aa10.72□□□□□ -0.69
CHMP3-205ENST00000409810 HM13Q8TCT9 377 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms