RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 H3BQ06 376 aaPredicted RBP4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 TAPBPO15533 448 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 TNFSF14O43557 240 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 RETP07949 1114 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 ALPIP09923 528 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 ERVK-10P10266 1014 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 MDH1P40925 334 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 SOX9P48436 509 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 RXRGP48443 463 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 LIG3P49916 1009 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 TPMTP51580 245 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 RPS21P63220 83 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 UBE2IP63279 158 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 SETDB1Q15047 1291 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 PON2Q15165 354 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 TBCCQ15814 346 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 WSCD2Q2TBF2 565 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 ATP13A5Q4VNC0 1218 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 MFSD4BQ5TF39 518 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 LRRC8EQ6NSJ5 796 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 CNSTQ6PJW8 725 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 ABRAXAS1Q6UWZ7 409 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 UNC5DQ6UXZ4 953 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 DENND6AQ8IWF6 608 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 RASGEF1AQ8N9B8 481 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 OR56A3Q8NH54 315 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 NSMCE1Q8WV22 266 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 IFT81Q8WYA0 676 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 DLG3Q92796 817 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 GLYATL1Q969I3 302 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 NTNG2Q96CW9 530 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 METTL2AQ96IZ6 378 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 TMEM79Q9BSE2 394 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 C20orf27Q9GZN8 174 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 STMN4Q9H169 189 aaPredicted RBP4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 TNKS2Q9H2K2 1166 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 SLC17A6Q9P2U8 582 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 FKBPLQ9UIM3 349 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 ZNF225Q9UK10 706 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 U3KQA8 63 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 PRRC2BQ5JSZ5 2229 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 GLYATL1P3A0A0U1RQE8 302 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 A0A1W2PPV9 198 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 C1QTNF3-AMACRE9PGA6 284 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 E2F3O00716 465 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 SLC22A2O15244 555 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 GLRA3O75311 464 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 USP12O75317 370 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 ZNF883P0CG24 379 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 SPRP35270 261 aaPredicted RBP4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 ATP6V0D1P61421 351 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 CRADDP78560 199 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 MPP1Q00013 466 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 GRSF1Q12849 480 aaKnown RBP eCLIP4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 COL9A2Q14055 689 aaPredicted RBP4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 ZRSR2Q15696 482 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 RBM20Q5T481 1227 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 KANK2Q63ZY3 851 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 HORMAD1Q86X24 394 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 ANKMY2Q8IV38 441 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 CARFQ8N187 725 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 IPMKQ8NFU5 416 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 OR4K2Q8NGD2 314 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 HDAC10Q969S8 669 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 ZNF514Q96K75 400 aaPredicted RBP4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 NTMT1Q9BV86 223 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 PITHD1Q9GZP4 211 aaPredicted RBP4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 DRC3Q9H069 523 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 PIDD1Q9HB75 910 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 PCDHGB2Q9Y5G2 931 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 ERICH4A6NGS2 130 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 FAM47DPA6NHR8 397 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 TPP1O14773 563 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 RAD51BO15315 384 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 ATG13O75143 517 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 FKBP9O95302 570 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 TRIM16O95361 564 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 TBX6O95947 436 aaPredicted RBP4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 MYZAPP0CAP1 466 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 SP9P0CG40 484 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 CALRP27797 417 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 GKP32189 559 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 CCR7P32248 378 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 PSMD8P48556 350 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 CDR1P51861 262 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 CDK3Q00526 305 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 CLPPQ16740 277 aaPredicted RBP4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 PYCR3Q53H96 274 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 KIAA0895LQ68EN5 471 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 RFLNAQ6ZTI6 216 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 YTHDF3Q7Z739 585 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 CLNKQ7Z7G1 428 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 PALM2Q8IXS6 379 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 RBFAQ8N0V3 343 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 L3MBTL4Q8NA19 623 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 UCMAQ8WVF2 138 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 INPP5DQ92835 1189 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 CNDP1Q96KN2 507 aa4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 MRPL57Q9BQC6 102 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-203ENST00000409606 IGFLR1Q9H665 355 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms