RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 BPHLQ86WA6 291 aaPredicted RBP16.35■□□□□ 0.21
CHMP3-203ENST00000409225 ZNF653Q96CK0 615 aa16.35■□□□□ 0.21
CHMP3-203ENST00000409225 SMAD5Q99717 465 aaKnown RBP16.35■□□□□ 0.21
CHMP3-203ENST00000409225 MAP3K3Q99759 626 aa16.35■□□□□ 0.21
CHMP3-203ENST00000409225 TIMM29Q9BSF4 260 aa16.35■□□□□ 0.21
CHMP3-203ENST00000409225 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.35■□□□□ 0.21
CHMP3-203ENST00000409225 OTOGQ6ZRI0 2925 aa16.35■□□□□ 0.21
CHMP3-203ENST00000409225 RGSL1A5PLK6 1076 aa16.34■□□□□ 0.21
CHMP3-203ENST00000409225 F5H423 210 aaPredicted RBP16.34■□□□□ 0.21
CHMP3-203ENST00000409225 CHUKO15111 745 aa16.34■□□□□ 0.21
CHMP3-203ENST00000409225 HNRNPRO43390 633 aaKnown RBP16.34■□□□□ 0.21
CHMP3-203ENST00000409225 MTX2O75431 263 aa16.34■□□□□ 0.21
CHMP3-203ENST00000409225 ATP1A3P13637 1013 aa16.34■□□□□ 0.21
CHMP3-203ENST00000409225 TCF4P15884 667 aa16.34■□□□□ 0.21
CHMP3-203ENST00000409225 IDSP22304 550 aa16.34■□□□□ 0.21
CHMP3-203ENST00000409225 VAV2P52735 878 aa16.34■□□□□ 0.21
CHMP3-203ENST00000409225 GPR19Q15760 415 aa16.34■□□□□ 0.21
CHMP3-203ENST00000409225 QPCTQ16769 361 aa16.34■□□□□ 0.21
CHMP3-203ENST00000409225 GLIS1Q8NBF1 620 aa16.34■□□□□ 0.21
CHMP3-203ENST00000409225 SLC38A9Q8NBW4 561 aa16.34■□□□□ 0.21
CHMP3-203ENST00000409225 CROCCQ5TZA2 2017 aa16.33■□□□□ 0.21
CHMP3-203ENST00000409225 GPR89AB7ZAQ6 455 aa16.33■□□□□ 0.2
CHMP3-203ENST00000409225 JCHAINP01591 159 aa16.33■□□□□ 0.2
CHMP3-203ENST00000409225 KLK3P07288 261 aaPredicted RBP16.33■□□□□ 0.2
CHMP3-203ENST00000409225 GPR89BP0CG08 455 aa16.33■□□□□ 0.2
CHMP3-203ENST00000409225 CES1P23141 567 aa16.33■□□□□ 0.2
CHMP3-203ENST00000409225 GRNP28799 593 aaKnown RBP16.33■□□□□ 0.2
CHMP3-203ENST00000409225 HNRNPH3P31942 346 aaKnown RBP16.33■□□□□ 0.2
CHMP3-203ENST00000409225 RPL26P61254 145 aaKnown RBP16.33■□□□□ 0.2
CHMP3-203ENST00000409225 UBE2HP62256 183 aa16.33■□□□□ 0.2
CHMP3-203ENST00000409225 TUBB4BP68371 445 aa16.33■□□□□ 0.2
CHMP3-203ENST00000409225 NIPAL4Q0D2K0 466 aa16.33■□□□□ 0.2
CHMP3-203ENST00000409225 ATP1A4Q13733 1029 aa16.33■□□□□ 0.2
CHMP3-203ENST00000409225 TUBB2AQ13885 445 aa16.33■□□□□ 0.2
CHMP3-203ENST00000409225 KYNUQ16719 465 aa16.33■□□□□ 0.2
CHMP3-203ENST00000409225 DNTTIP2Q5QJE6 756 aaKnown RBP16.33■□□□□ 0.2
CHMP3-203ENST00000409225 AGAP9Q5VTM2 703 aa16.33■□□□□ 0.2
CHMP3-203ENST00000409225 ALG1LQ6GMV1 187 aa16.33■□□□□ 0.2
CHMP3-203ENST00000409225 ZNF517Q6ZMY9 492 aaPredicted RBP16.33■□□□□ 0.2
CHMP3-203ENST00000409225 MED25Q71SY5 747 aa16.33■□□□□ 0.2
CHMP3-203ENST00000409225 TMEM102Q8N9M5 508 aaPredicted RBP16.33■□□□□ 0.2
CHMP3-203ENST00000409225 GPR26Q8NDV2 337 aa16.33■□□□□ 0.2
CHMP3-203ENST00000409225 GPR150Q8NGU9 434 aa16.33■□□□□ 0.2
CHMP3-203ENST00000409225 ARRDC2Q8TBH0 407 aa16.33■□□□□ 0.2
CHMP3-203ENST00000409225 GLYATL1Q969I3 302 aa16.33■□□□□ 0.2
CHMP3-203ENST00000409225 TUBB2BQ9BVA1 445 aa16.33■□□□□ 0.2
CHMP3-203ENST00000409225 UNKQ9C0B0 810 aaKnown RBP16.33■□□□□ 0.2
CHMP3-203ENST00000409225 KCND1Q9NSA2 647 aa16.33■□□□□ 0.2
CHMP3-203ENST00000409225 RBM22Q9NW64 420 aaKnown RBP eCLIP16.33■□□□□ 0.2
CHMP3-203ENST00000409225 TCFL5Q9UL49 500 aa16.33■□□□□ 0.2
CHMP3-203ENST00000409225 RPL26L1Q9UNX3 145 aaKnown RBP16.33■□□□□ 0.2
CHMP3-203ENST00000409225 WDR37Q9Y2I8 494 aa16.33■□□□□ 0.2
CHMP3-203ENST00000409225 POLQO75417 2590 aa16.33■□□□□ 0.2
CHMP3-203ENST00000409225 UBA6A0AVT1 1052 aaPredicted RBP16.32■□□□□ 0.2
CHMP3-203ENST00000409225 SLC4A1P02730 911 aa16.32■□□□□ 0.2
CHMP3-203ENST00000409225 RAB40ALP0C0E4 278 aa16.32■□□□□ 0.2
CHMP3-203ENST00000409225 FECHP22830 423 aa16.32■□□□□ 0.2
CHMP3-203ENST00000409225 ZNF165P49910 485 aa16.32■□□□□ 0.2
CHMP3-203ENST00000409225 RRADP55042 308 aa16.32■□□□□ 0.2
CHMP3-203ENST00000409225 GSDMDP57764 484 aa16.32■□□□□ 0.2
CHMP3-203ENST00000409225 HSD11B2P80365 405 aa16.32■□□□□ 0.2
CHMP3-203ENST00000409225 PRAMEF17Q5VTA0 474 aa16.32■□□□□ 0.2
CHMP3-203ENST00000409225 WASH2PQ6VEQ5 465 aa16.32■□□□□ 0.2
CHMP3-203ENST00000409225 KMT5CQ86Y97 462 aa16.32■□□□□ 0.2
CHMP3-203ENST00000409225 ZNF547Q8IVP9 402 aa16.32■□□□□ 0.2
CHMP3-203ENST00000409225 D2HGDHQ8N465 521 aa16.32■□□□□ 0.2
CHMP3-203ENST00000409225 ZBTB2Q8N680 514 aa16.32■□□□□ 0.2
CHMP3-203ENST00000409225 ZNF501Q96CX3 271 aaPredicted RBP16.32■□□□□ 0.2
CHMP3-203ENST00000409225 EID2BQ96D98 161 aa16.32■□□□□ 0.2
CHMP3-203ENST00000409225 SGSM3Q96HU1 749 aa16.32■□□□□ 0.2
CHMP3-203ENST00000409225 ZSCAN5AQ9BUG6 496 aa16.32■□□□□ 0.2
CHMP3-203ENST00000409225 ILKAPQ9H0C8 392 aaPredicted RBP16.32■□□□□ 0.2
CHMP3-203ENST00000409225 CLSTN2Q9H4D0 955 aa16.32■□□□□ 0.2
CHMP3-203ENST00000409225 PCDH18Q9HCL0 1135 aa16.32■□□□□ 0.2
CHMP3-203ENST00000409225 B3GNT3Q9Y2A9 372 aa16.32■□□□□ 0.2
CHMP3-203ENST00000409225 TLCD2A6NGC4 264 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 MFSD11O43934 449 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 CDK14O94921 469 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 HLA-DQB2P05538 268 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 RARAP10276 462 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 FERP16591 822 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 PCK1P35558 622 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 HALP42357 657 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 PLCL1Q15111 1095 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 KHDC1Q4VXA5 237 aaKnown RBP16.31■□□□□ 0.2
CHMP3-203ENST00000409225 BOLA3Q53S33 107 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 PLEKHS1Q5SXH7 462 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 VWA5B1Q5TIE3 1220 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 CDKAL1Q5VV42 579 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 TXNRD3NBQ6F5E7 133 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 PPP1R2P3Q6NXS1 205 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 KLHL35Q6PF15 583 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 LRRC49Q8IUZ0 686 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 DSELQ8IZU8 1212 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 TRAM1L1Q8N609 369 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 LRRN4Q8WUT4 740 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 MAML1Q92585 1016 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 NUP85Q9BW27 656 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 NLNQ9BYT8 704 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 C5AR2Q9P296 337 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms