RNA–Protein interactions for RNA: ENST00000408509.1

MIR548F3-201, Transcript of microRNA 548f-3, humanhuman

BASIC

Gene MIR548F3, Length 87 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548F3-201ENST00000408509 MATKP42679 507 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 UQCRFS1P47985 274 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 TRPC1P48995 793 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 NASPP49321 788 aaPredicted RBP-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 SLC37A1P57057 533 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 SHC2P98077 582 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 PDE1BQ01064 536 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 SNTB1Q13884 538 aaKnown RBP-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 ZNF234Q14588 700 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 P2RY6Q15077 328 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 FSCN1Q16658 493 aaKnown RBP-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 MS4A18Q3C1V0 323 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 ACSM2BQ68CK6 577 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 SPNS3Q6ZMD2 512 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 ZFAND4Q86XD8 727 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 KLBQ86Z14 1044 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 DHX40Q8IX18 779 aaKnown RBP-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 ZDHHC23Q8IYP9 409 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 GOLGA6L2Q8N9W4 650 aaPredicted RBP-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 SCCPDHQ8NBX0 429 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 KCTD6Q8NC69 237 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 OR5AP2Q8NGF4 316 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 TBC1D22AQ8WUA7 517 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 PIGTQ969N2 578 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 EXOC4Q96A65 974 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 GCC1Q96CN9 775 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 C16orf74Q96GX8 76 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 DGAT2Q96PD7 388 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 SIGLEC12Q96PQ1 595 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 ZNF382Q96SR6 550 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 KXD1Q9BQD3 176 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 ESRP2Q9H6T0 727 aaKnown RBP-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 MED20Q9H944 212 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 COG4Q9H9E3 785 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 THG1LQ9NWX6 298 aaKnown RBP-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 SLC27A6Q9Y2P4 619 aa-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 PRG3Q9Y2Y8 225 aaPredicted RBP-2.15□□□□□ -2.75
MIR548F3-201ENST00000408509 USP19O94966 1318 aa-2.16□□□□□ -2.75
MIR548F3-201ENST00000408509 LOC105371242A0A075B767 164 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 IGHV4-30-2A0A087WSY4 118 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 ACTL6BO94805 426 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 CCNDBP1O95273 360 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 CSF2RAP15509 400 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 DCTDP32321 178 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 MAGEA11P43364 429 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 NRIP1P48552 1158 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 CYP2J2P51589 502 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 PDX1P52945 283 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 MRPS9P82933 396 aaKnown RBP-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 CHAF1AQ13111 956 aaPredicted RBP-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 CIRBPQ14011 172 aaKnown RBP-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 TERF2Q15554 542 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 CTF1Q16619 201 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 INO80CQ6PI98 192 aaPredicted RBP-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 KRT28Q7Z3Y7 464 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 MDGA2Q7Z553 956 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 RNF130Q86XS8 419 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 ZMIZ2Q8NF64 920 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 KBTBD8Q8NFY9 601 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 OTUD7AQ8TE49 926 aaPredicted RBP-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 ZNF486Q96H40 463 aaPredicted RBP-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 PRMT6Q96LA8 375 aaPredicted RBP-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 MAP3K3Q99759 626 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 CLSTN3Q9BQT9 956 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 FRMD8Q9BZ67 464 aaPredicted RBP-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 TRIM5Q9C035 493 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 NXF3Q9H4D5 531 aaKnown RBP-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 MAN1C1Q9NR34 630 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 CALCOCO1Q9P1Z2 691 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 WDR35Q9P2L0 1181 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 TMX2Q9Y320 296 aa-2.16□□□□□ -2.76
MIR548F3-201ENST00000408509 CR1P17927 2039 aa-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 A0A0G2JN53 185 aa-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 TCRBV7S3A2A0A539 114 aa-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 RHPN2P1A8MT19 583 aa-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 SMAD9O15198 467 aaKnown RBP-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 AHSGP02765 367 aa-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 NCLP19338 710 aaKnown RBP-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 POLR2CP19387 275 aaPredicted RBP-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 PRDX5P30044 214 aa-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 ITGAEP38570 1179 aa-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 GPR143P51810 404 aa-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 CTSCP53634 463 aa-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 ITGA8P53708 1063 aa-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 UCP3P55916 312 aa-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 KRT83P78385 493 aa-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 ZNF45Q02386 682 aa-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 LETM2Q2VYF4 491 aa-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 ANO4Q32M45 955 aa-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 GRAMD1BQ3KR37 738 aa-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 KHDC1Q4VXA5 237 aaKnown RBP-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 TMEM35AQ53FP2 167 aa-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 DCLRE1AQ6PJP8 1040 aa-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 SHISA6Q6ZSJ9 500 aa-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 TTC7BQ86TV6 843 aa-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 CATSPER3Q86XQ3 398 aa-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 ERI1Q8IV48 349 aaKnown RBP-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 ZNF664Q8N3J9 261 aa-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 C4orf32Q8N8J7 132 aa-2.17□□□□□ -2.76
MIR548F3-201ENST00000408509 EXD3Q8N9H8 876 aa-2.17□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms