RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 AGAP3Q96P47 875 aa12.65□□□□□ -0.38
PRAME-206ENST00000406503 PSMG3-AS1Q96PY0 264 aa12.65□□□□□ -0.38
PRAME-206ENST00000406503 VPS35Q96QK1 796 aa12.65□□□□□ -0.38
PRAME-206ENST00000406503 ADGRE3Q9BY15 652 aa12.65□□□□□ -0.38
PRAME-206ENST00000406503 TRIM55Q9BYV6 548 aa12.65□□□□□ -0.38
PRAME-206ENST00000406503 RAB33BQ9H082 229 aa12.65□□□□□ -0.38
PRAME-206ENST00000406503 SLC25A51Q9H1U9 297 aa12.65□□□□□ -0.38
PRAME-206ENST00000406503 CBX8Q9HC52 389 aa12.65□□□□□ -0.38
PRAME-206ENST00000406503 WASH6PQ9NQA3 447 aa12.65□□□□□ -0.38
PRAME-206ENST00000406503 CTTNBP2NLQ9P2B4 639 aa12.65□□□□□ -0.38
PRAME-206ENST00000406503 UVRAGQ9P2Y5 699 aa12.65□□□□□ -0.38
PRAME-206ENST00000406503 EPHA6Q9UF33 1036 aa12.65□□□□□ -0.38
PRAME-206ENST00000406503 PCDHGA6Q9Y5G7 932 aa12.65□□□□□ -0.38
PRAME-206ENST00000406503 HEY1Q9Y5J3 304 aa12.65□□□□□ -0.38
PRAME-206ENST00000406503 PCM1Q15154 2024 aa12.65□□□□□ -0.38
PRAME-206ENST00000406503 IGHV5-51A0A0C4DH38 117 aa12.64□□□□□ -0.39
PRAME-206ENST00000406503 PDZK1P1A8MUH7 402 aa12.64□□□□□ -0.39
PRAME-206ENST00000406503 VEGFDO43915 354 aa12.64□□□□□ -0.39
PRAME-206ENST00000406503 DNAJB5O75953 348 aa12.64□□□□□ -0.39
PRAME-206ENST00000406503 GP1BBP13224 206 aa12.64□□□□□ -0.39
PRAME-206ENST00000406503 AMD1P17707 334 aa12.64□□□□□ -0.39
PRAME-206ENST00000406503 NELFEP18615 380 aaKnown RBP12.64□□□□□ -0.39
PRAME-206ENST00000406503 CD68P34810 354 aaPredicted RBP12.64□□□□□ -0.39
PRAME-206ENST00000406503 NOP2P46087 812 aaKnown RBP12.64□□□□□ -0.39
PRAME-206ENST00000406503 CDK18Q07002 472 aa12.64□□□□□ -0.39
PRAME-206ENST00000406503 AP1B1Q10567 949 aa12.64□□□□□ -0.39
PRAME-206ENST00000406503 SLC14A2Q15849 920 aa12.64□□□□□ -0.39
PRAME-206ENST00000406503 CACHD1Q5VU97 1274 aa12.64□□□□□ -0.39
PRAME-206ENST00000406503 CAVIN1Q6NZI2 390 aaKnown RBP12.64□□□□□ -0.39
PRAME-206ENST00000406503 CERS6Q6ZMG9 384 aa12.64□□□□□ -0.39
PRAME-206ENST00000406503 NT5DC3Q86UY8 548 aa12.64□□□□□ -0.39
PRAME-206ENST00000406503 LURAP1LQ8IV03 231 aa12.64□□□□□ -0.39
PRAME-206ENST00000406503 RASGRP3Q8IV61 690 aa12.64□□□□□ -0.39
PRAME-206ENST00000406503 TRIM48Q8IWZ4 208 aa12.64□□□□□ -0.39
PRAME-206ENST00000406503 BPIFA1Q9NP55 256 aa12.64□□□□□ -0.39
PRAME-206ENST00000406503 LHX9Q9NQ69 397 aa12.64□□□□□ -0.39
PRAME-206ENST00000406503 HAUS2Q9NVX0 235 aa12.64□□□□□ -0.39
PRAME-206ENST00000406503 TRIM10Q9UDY6 481 aa12.64□□□□□ -0.39
PRAME-206ENST00000406503 LNPEPQ9UIQ6 1025 aa12.64□□□□□ -0.39
PRAME-206ENST00000406503 TLK1Q9UKI8 766 aa12.64□□□□□ -0.39
PRAME-206ENST00000406503 DOCK10Q96BY6 2186 aa12.64□□□□□ -0.39
PRAME-206ENST00000406503 MDC1Q14676 2089 aaKnown RBP12.63□□□□□ -0.39
PRAME-206ENST00000406503 LRRD1A4D1F6 860 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 CDC14CA4D256 554 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 GOLGA6L22H0YM25 854 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 GAPDHSO14556 408 aaPredicted RBP12.63□□□□□ -0.39
PRAME-206ENST00000406503 KATNA1O75449 491 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 CREG1O75629 220 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 RASSF9O75901 435 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 CDK14O94921 469 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 H2AFZP0C0S5 128 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 FOLR1P15328 257 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 HNRNPH3P31942 346 aaKnown RBP12.63□□□□□ -0.39
PRAME-206ENST00000406503 CASP14P31944 242 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 UQCRFS1P47985 274 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 CTSCP53634 463 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 PMS2P54278 862 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 TMEM115Q12893 351 aaPredicted RBP12.63□□□□□ -0.39
PRAME-206ENST00000406503 DNASE1L3Q13609 305 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 SEPT6Q14141 434 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 KCNAB1Q14722 419 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.63□□□□□ -0.39
PRAME-206ENST00000406503 PWWP2BQ6NUJ5 590 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 KDELC1Q6UW63 502 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 FAM83HQ6ZRV2 1179 aaPredicted RBP12.63□□□□□ -0.39
PRAME-206ENST00000406503 H2AFVQ71UI9 128 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 TTC30BQ8N4P2 665 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 FAM26EQ8N5C1 309 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 STAMBPL1Q96FJ0 436 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 SLC41A2Q96JW4 573 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 GPR63Q9BZJ6 419 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 GLOD4Q9HC38 313 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 POLHQ9Y253 713 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 CSMD1Q96PZ7 3565 aa12.63□□□□□ -0.39
PRAME-206ENST00000406503 RFPL1O75677 317 aa12.62□□□□□ -0.39
PRAME-206ENST00000406503 NDST3O95803 873 aa12.62□□□□□ -0.39
PRAME-206ENST00000406503 RECKO95980 971 aa12.62□□□□□ -0.39
PRAME-206ENST00000406503 IDSP22304 550 aa12.62□□□□□ -0.39
PRAME-206ENST00000406503 FECHP22830 423 aa12.62□□□□□ -0.39
PRAME-206ENST00000406503 PTPN3P26045 913 aa12.62□□□□□ -0.39
PRAME-206ENST00000406503 UBASH3AP57075 661 aa12.62□□□□□ -0.39
PRAME-206ENST00000406503 RPS18P62269 152 aaKnown RBP12.62□□□□□ -0.39
PRAME-206ENST00000406503 DMPKQ09013 629 aa12.62□□□□□ -0.39
PRAME-206ENST00000406503 MESDQ14696 234 aa12.62□□□□□ -0.39
PRAME-206ENST00000406503 PRKD1Q15139 912 aaPredicted RBP12.62□□□□□ -0.39
PRAME-206ENST00000406503 SLC18A3Q16572 532 aa12.62□□□□□ -0.39
PRAME-206ENST00000406503 CPZQ66K79 652 aa12.62□□□□□ -0.39
PRAME-206ENST00000406503 IRGCQ6NXR0 463 aa12.62□□□□□ -0.39
PRAME-206ENST00000406503 FAM199XQ6PEV8 388 aaPredicted RBP12.62□□□□□ -0.39
PRAME-206ENST00000406503 PPP1R3BQ86XI6 285 aa12.62□□□□□ -0.39
PRAME-206ENST00000406503 VSIG1Q86XK7 387 aa12.62□□□□□ -0.39
PRAME-206ENST00000406503 APLFQ8IW19 511 aaPredicted RBP12.62□□□□□ -0.39
PRAME-206ENST00000406503 RBM12BQ8IXT5 1001 aaKnown RBP12.62□□□□□ -0.39
PRAME-206ENST00000406503 ZNF830Q96NB3 372 aaPredicted RBP12.62□□□□□ -0.39
PRAME-206ENST00000406503 UBP1Q9NZI7 540 aa12.62□□□□□ -0.39
PRAME-206ENST00000406503 KCND3Q9UK17 655 aa12.62□□□□□ -0.39
PRAME-206ENST00000406503 LUC7L2Q9Y383 392 aaKnown RBP12.62□□□□□ -0.39
PRAME-206ENST00000406503 PCDHB3Q9Y5E6 796 aa12.62□□□□□ -0.39
PRAME-206ENST00000406503 NOTCH2Q04721 2471 aa12.61□□□□□ -0.39
PRAME-206ENST00000406503 LOC285095A0A1B0GVY8 99 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms