RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 PJA1Q8NG27 643 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 TBATAQ96M53 351 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 CACNA1CQ13936 2221 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 IRF6O14896 467 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 AQP1P29972 269 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 TUBA4AP68366 448 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 LDLRAP1Q5SW96 308 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 OR10A6Q8NH74 314 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 ZFAND2BQ8WV99 257 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 MYO19Q96H55 970 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 FAM84AQ96KN4 292 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 MAGEE1Q9HCI5 957 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 ACSS2Q9NR19 701 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 RAB23Q9ULC3 237 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 UBR2Q8IWV8 1755 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 MT-ND1P03886 318 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 CAPN13Q6MZZ7 669 aaPredicted RBP13.23□□□□□ -0.29
SNED1-205ENST00000405547 CXorf40AQ8TE69 158 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 KAT8Q9H7Z6 458 aaKnown RBP13.23□□□□□ -0.29
SNED1-205ENST00000405547 TRPV5Q9NQA5 729 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 DNAJC11Q9NVH1 559 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 NKX1-2Q9UD57 310 aaPredicted RBP13.23□□□□□ -0.29
SNED1-205ENST00000405547 TRPS1Q9UHF7 1281 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 GPC6Q9Y625 555 aaPredicted RBP13.23□□□□□ -0.29
SNED1-205ENST00000405547 SDK1Q7Z5N4 2213 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 ARHGEF33A8MVX0 844 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 EFCAB9A8MZ26 197 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 RGS20O76081 388 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 HERVK_113P63132 956 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 SULT1C3Q6IMI6 304 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 APOLD1Q96LR9 279 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 ERVK-6Q9BXR3 956 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 PDZD7Q9H5P4 517 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 PHF11Q9UIL8 331 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 FBXW11Q9UKB1 542 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 PPM1HQ9ULR3 514 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 TELO2Q9Y4R8 837 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 TRIM17Q9Y577 477 aa13.23□□□□□ -0.29
SNED1-205ENST00000405547 TMEM63AO94886 807 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 RPL4P36578 427 aaKnown RBP13.22□□□□□ -0.29
SNED1-205ENST00000405547 HNRNPDQ14103 355 aaKnown RBP13.22□□□□□ -0.29
SNED1-205ENST00000405547 TSTD2Q5T7W7 516 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 KIAA0930Q6ICG6 404 aaPredicted RBP13.22□□□□□ -0.29
SNED1-205ENST00000405547 PDCD4Q53EL6 469 aaKnown RBP13.22□□□□□ -0.29
SNED1-205ENST00000405547 GCNT6Q5T4J0 391 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 PDSS2Q86YH6 399 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 SPATA22Q8NHS9 363 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 GPN1Q9HCN4 374 aaPredicted RBP13.22□□□□□ -0.29
SNED1-205ENST00000405547 NCKAP1Q9Y2A7 1128 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 PCDHAC2Q9Y5I4 1007 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 SMIM28A0A1B0GU29 152 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 RPIAP49247 311 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 RGS1Q08116 209 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 TUSC3Q13454 348 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 ALG11Q2TAA5 492 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 ZNF730Q6ZMV8 503 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 USP43Q70EL4 1123 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 TMEM126BQ8IUX1 230 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 ZDHHC21Q8IVQ6 265 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 CCDC36Q8IYA8 594 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 CFAP52Q8N1V2 620 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 NSMCE3Q96MG7 304 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 HAPLN3Q96S86 360 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 C3orf14Q9HBI5 128 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 RAI2Q9Y5P3 530 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 TRIP11Q15643 1979 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 A0A1W2PQ67 120 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 A0A1W2PQH9 124 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 FAM234BA2RU67 622 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 PIP5K1BO14986 540 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 C9P02748 559 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 NADK2Q4G0N4 442 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 COLGALT2Q8IYK4 626 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 LPPQ93052 612 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 ZNF347Q96SE7 839 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 DNAJB9Q9UBS3 223 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 H0YGN5 161 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 OR10H2O60403 315 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 MT-CYBP00156 380 aaPredicted RBP13.22□□□□□ -0.29
SNED1-205ENST00000405547 DNAJB1P25685 340 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 OMPP47874 163 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 USP41Q3LFD5 358 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 ANO7Q6IWH7 933 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 AGMOQ6ZNB7 445 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 CITED4Q96RK1 184 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 HNRNPABQ99729 332 aaKnown RBP13.22□□□□□ -0.29
SNED1-205ENST00000405547 NEK6Q9HC98 313 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 NFS1Q9Y697 457 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 CDK5RAP2Q96SN8 1893 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 IGKV6D-41A0A0C4DH26 115 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 PQBP1O60828 265 aaKnown RBP13.22□□□□□ -0.29
SNED1-205ENST00000405547 C1RP00736 705 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 AP3S2P59780 193 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 HSF2Q03933 536 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 SNAPC1Q16533 368 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 FAM174BQ3ZCQ3 159 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 DCST1Q5T197 706 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 RELL1Q8IUW5 271 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 PHC3Q8NDX5 983 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 SPPL2BQ8TCT7 592 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms