RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 FNBP1LQ5T0N5 605 aa14.36□□□□□ -0.11
CDPF1-203ENST00000404583 CASC4Q6P4E1 433 aa14.36□□□□□ -0.11
CDPF1-203ENST00000404583 AFTPHQ6ULP2 937 aa14.36□□□□□ -0.11
CDPF1-203ENST00000404583 RAB44Q7Z6P3 723 aaPredicted RBP14.36□□□□□ -0.11
CDPF1-203ENST00000404583 AGGF1Q8N302 714 aaeCLIP14.36□□□□□ -0.11
CDPF1-203ENST00000404583 TRIM56Q9BRZ2 755 aaKnown RBP14.36□□□□□ -0.11
CDPF1-203ENST00000404583 TIMM29Q9BSF4 260 aa14.36□□□□□ -0.11
CDPF1-203ENST00000404583 OSGEPL1Q9H4B0 414 aa14.36□□□□□ -0.11
CDPF1-203ENST00000404583 MRM3Q9HC36 420 aaKnown RBP14.36□□□□□ -0.11
CDPF1-203ENST00000404583 ANGPTL2Q9UKU9 493 aa14.36□□□□□ -0.11
CDPF1-203ENST00000404583 UNC13CQ8NB66 2214 aa14.36□□□□□ -0.11
CDPF1-203ENST00000404583 IGLV3-16A0A075B6K0 115 aa14.35□□□□□ -0.11
CDPF1-203ENST00000404583 EFCAB8A8MWE9 144 aa14.35□□□□□ -0.11
CDPF1-203ENST00000404583 KIF2AO00139 706 aaPredicted RBP14.35□□□□□ -0.11
CDPF1-203ENST00000404583 CASC3O15234 703 aaKnown RBP14.35□□□□□ -0.11
CDPF1-203ENST00000404583 RAD51CO43502 376 aa14.35□□□□□ -0.11
CDPF1-203ENST00000404583 SGTAO43765 313 aa14.35□□□□□ -0.11
CDPF1-203ENST00000404583 PBLDP30039 288 aaPredicted RBP14.35□□□□□ -0.11
CDPF1-203ENST00000404583 MAGEA3P43357 314 aa14.35□□□□□ -0.11
CDPF1-203ENST00000404583 CLCNKAP51800 687 aa14.35□□□□□ -0.11
CDPF1-203ENST00000404583 FASTKD1Q53R41 847 aaKnown RBP14.35□□□□□ -0.11
CDPF1-203ENST00000404583 ZNF572Q7Z3I7 529 aaPredicted RBP14.35□□□□□ -0.11
CDPF1-203ENST00000404583 HOOK3Q86VS8 718 aa14.35□□□□□ -0.11
CDPF1-203ENST00000404583 C17orf82Q86X59 251 aaPredicted RBP14.35□□□□□ -0.11
CDPF1-203ENST00000404583 ARL14Q8N4G2 192 aa14.35□□□□□ -0.11
CDPF1-203ENST00000404583 SIGLEC10Q96LC7 697 aa14.35□□□□□ -0.11
CDPF1-203ENST00000404583 PRDM8Q9NQV8 689 aa14.35□□□□□ -0.11
CDPF1-203ENST00000404583 RABGEF1Q9UJ41 708 aa14.35□□□□□ -0.11
CDPF1-203ENST00000404583 WASF3Q9UPY6 502 aa14.35□□□□□ -0.11
CDPF1-203ENST00000404583 SNX24Q9Y343 169 aa14.35□□□□□ -0.11
CDPF1-203ENST00000404583 CFAP99D6REC4 459 aa14.34□□□□□ -0.11
CDPF1-203ENST00000404583 VAPBO95292 243 aa14.34□□□□□ -0.11
CDPF1-203ENST00000404583 GP1BAP07359 652 aa14.34□□□□□ -0.11
CDPF1-203ENST00000404583 GLB1P16278 677 aa14.34□□□□□ -0.11
CDPF1-203ENST00000404583 RPL21P46778 160 aaKnown RBP14.34□□□□□ -0.11
CDPF1-203ENST00000404583 ITGA8P53708 1063 aa14.34□□□□□ -0.11
CDPF1-203ENST00000404583 E2F1Q01094 437 aa14.34□□□□□ -0.11
CDPF1-203ENST00000404583 CKAP4Q07065 602 aaKnown RBP14.34□□□□□ -0.11
CDPF1-203ENST00000404583 SEMA3AQ14563 771 aa14.34□□□□□ -0.11
CDPF1-203ENST00000404583 SMAD1Q15797 465 aaKnown RBP14.34□□□□□ -0.11
CDPF1-203ENST00000404583 SEPT7Q16181 437 aaKnown RBP14.34□□□□□ -0.11
CDPF1-203ENST00000404583 ST3GAL2Q16842 350 aa14.34□□□□□ -0.11
CDPF1-203ENST00000404583 HIBCHQ6NVY1 386 aaPredicted RBP14.34□□□□□ -0.11
CDPF1-203ENST00000404583 MAATS1Q7Z4T9 603 aa14.34□□□□□ -0.11
CDPF1-203ENST00000404583 AMZ2Q86W34 360 aa14.34□□□□□ -0.11
CDPF1-203ENST00000404583 OR6C4Q8NGE1 309 aa14.34□□□□□ -0.11
CDPF1-203ENST00000404583 HEXDCQ8WVB3 486 aa14.34□□□□□ -0.11
CDPF1-203ENST00000404583 NAT6Q93015 286 aa14.34□□□□□ -0.11
CDPF1-203ENST00000404583 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.34□□□□□ -0.11
CDPF1-203ENST00000404583 CCDC74AQ96AQ1 378 aa14.34□□□□□ -0.11
CDPF1-203ENST00000404583 SNF8Q96H20 258 aa14.34□□□□□ -0.11
CDPF1-203ENST00000404583 SGSM3Q96HU1 749 aa14.34□□□□□ -0.11
CDPF1-203ENST00000404583 ZNF514Q96K75 400 aaPredicted RBP14.34□□□□□ -0.11
CDPF1-203ENST00000404583 PWWP2AQ96N64 755 aa14.34□□□□□ -0.11
CDPF1-203ENST00000404583 FCRL3Q96P31 734 aaPredicted RBP14.34□□□□□ -0.11
CDPF1-203ENST00000404583 CCDC3Q9BQI4 270 aa14.34□□□□□ -0.11
CDPF1-203ENST00000404583 CATSPERZQ9NTU4 200 aa14.34□□□□□ -0.11
CDPF1-203ENST00000404583 SAMD15Q9P1V8 674 aa14.34□□□□□ -0.11
CDPF1-203ENST00000404583 LRIT1Q9P2V4 623 aa14.34□□□□□ -0.11
CDPF1-203ENST00000404583 DNMT3AQ9Y6K1 912 aaPredicted RBP14.34□□□□□ -0.11
CDPF1-203ENST00000404583 RNF215Q9Y6U7 377 aa14.34□□□□□ -0.11
CDPF1-203ENST00000404583 USP24Q9UPU5 2620 aa14.34□□□□□ -0.11
CDPF1-203ENST00000404583 FAM237BA0A1B0GVD1 139 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 MAGEB16A2A368 324 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 A6NCN8 305 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 FAM187AA6NFU0 413 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 PRR19A6NJB7 356 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 GOLGA8KD6RF30 607 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 GOLGA8TH3BQL2 631 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 CD3EAPO15446 510 aaKnown RBP14.33□□□□□ -0.11
CDPF1-203ENST00000404583 OPA1O60313 960 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 OR1I1O60431 355 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 BANF1O75531 89 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 SEC31AO94979 1220 aaKnown RBP14.33□□□□□ -0.11
CDPF1-203ENST00000404583 CDK4P11802 303 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 F3P13726 295 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 ARNTP27540 789 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 RPL10P27635 214 aaKnown RBP14.33□□□□□ -0.11
CDPF1-203ENST00000404583 INSM1Q01101 510 aaPredicted RBP14.33□□□□□ -0.11
CDPF1-203ENST00000404583 DHX9Q08211 1270 aaKnown RBP14.33□□□□□ -0.11
CDPF1-203ENST00000404583 NFE2L1Q14494 772 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 ITIH4Q14624 930 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 MORF4L2Q15014 288 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 WHAMMP3Q1A5X7 153 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 ANKRD20A4Q4UJ75 823 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 BCL7AQ4VC05 210 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 MSS51Q4VC12 460 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 LYPLAL1Q5VWZ2 237 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 IYDQ6PHW0 289 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 LDB1Q86U70 411 aaPredicted RBP14.33□□□□□ -0.11
CDPF1-203ENST00000404583 MARCH9Q86YJ5 346 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 CLDN19Q8N6F1 224 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 KIF18AQ8NI77 898 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 MAPK15Q8TD08 544 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 SLC37A2Q8TED4 501 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 SCNM1Q9BWG6 230 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 ABCG4Q9H172 646 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 DPH5Q9H2P9 285 aa14.33□□□□□ -0.11
CDPF1-203ENST00000404583 SCHIP1Q9P0W5 487 aaPredicted RBP14.33□□□□□ -0.11
CDPF1-203ENST00000404583 MARCH4Q9P2E8 410 aaPredicted RBP14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms