RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 SNX3O60493 162 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 FGF3P11487 239 aaPredicted RBP20.76■□□□□ 0.91
TPM1-208ENST00000404484 CREB5Q02930 508 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 ZSCAN26Q16670 478 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 GPRC6AQ5T6X5 926 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 LIPMQ5VYY2 423 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 PAQR3Q6TCH7 311 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 SPATA21Q7Z572 469 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 TMEM151AQ8N4L1 468 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 IL17RCQ8NAC3 791 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 AP2M1Q96CW1 435 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 SEC16BQ96JE7 1060 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 PANX3Q96QZ0 392 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 PLCD4Q9BRC7 762 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 RIOK2Q9BVS4 552 aaKnown RBP20.76■□□□□ 0.91
TPM1-208ENST00000404484 ABCG8Q9H221 673 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 TFB2MQ9H5Q4 396 aaKnown RBP20.76■□□□□ 0.91
TPM1-208ENST00000404484 THAP1Q9NVV9 213 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 KLHL42Q9P2K6 505 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 DHRS7Q9Y394 339 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 FADS3Q9Y5Q0 445 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 QSOX1O00391 747 aa20.75■□□□□ 0.91
TPM1-208ENST00000404484 MID1O15344 667 aa20.75■□□□□ 0.91
TPM1-208ENST00000404484 TSPAN6O43657 245 aa20.75■□□□□ 0.91
TPM1-208ENST00000404484 LZTS3O60299 673 aaPredicted RBP20.75■□□□□ 0.91
TPM1-208ENST00000404484 KLF8O95600 359 aaPredicted RBP20.75■□□□□ 0.91
TPM1-208ENST00000404484 HOXB2P14652 356 aa20.75■□□□□ 0.91
TPM1-208ENST00000404484 CD1DP15813 335 aa20.75■□□□□ 0.91
TPM1-208ENST00000404484 TFEBP19484 476 aa20.75■□□□□ 0.91
TPM1-208ENST00000404484 IL2P60568 153 aa20.75■□□□□ 0.91
TPM1-208ENST00000404484 DMWDQ09019 674 aa20.75■□□□□ 0.91
TPM1-208ENST00000404484 CRY1Q16526 586 aa20.75■□□□□ 0.91
TPM1-208ENST00000404484 SETMARQ53H47 684 aaPredicted RBP20.75■□□□□ 0.91
TPM1-208ENST00000404484 LDLRAP1Q5SW96 308 aa20.75■□□□□ 0.91
TPM1-208ENST00000404484 PIP5KL1Q5T9C9 394 aa20.75■□□□□ 0.91
TPM1-208ENST00000404484 OTOAQ7RTW8 1153 aa20.75■□□□□ 0.91
TPM1-208ENST00000404484 NLRP8Q86W28 1048 aa20.75■□□□□ 0.91
TPM1-208ENST00000404484 SPATS2Q86XZ4 545 aaKnown RBP20.75■□□□□ 0.91
TPM1-208ENST00000404484 SPATA6LQ8N4H0 392 aa20.75■□□□□ 0.91
TPM1-208ENST00000404484 RHEBL1Q8TAI7 183 aa20.75■□□□□ 0.91
TPM1-208ENST00000404484 CD200R1Q8TD46 325 aa20.75■□□□□ 0.91
TPM1-208ENST00000404484 INPP5DQ92835 1189 aa20.75■□□□□ 0.91
TPM1-208ENST00000404484 SCAMP4Q969E2 229 aa20.75■□□□□ 0.91
TPM1-208ENST00000404484 NUS1Q96E22 293 aa20.75■□□□□ 0.91
TPM1-208ENST00000404484 BOCQ9BWV1 1114 aa20.75■□□□□ 0.91
TPM1-208ENST00000404484 PTPRZ1P23471 2315 aaPredicted RBP20.74■□□□□ 0.91
TPM1-208ENST00000404484 TMEM114B3SHH9 223 aa20.74■□□□□ 0.91
TPM1-208ENST00000404484 EBAG9O00559 213 aa20.74■□□□□ 0.91
TPM1-208ENST00000404484 SNNO75324 88 aaPredicted RBP20.74■□□□□ 0.91
TPM1-208ENST00000404484 AP2A2O94973 939 aa20.74■□□□□ 0.91
TPM1-208ENST00000404484 TGDSO95455 350 aa20.74■□□□□ 0.91
TPM1-208ENST00000404484 OR56A5P0C7T3 313 aa20.74■□□□□ 0.91
TPM1-208ENST00000404484 C6P13671 934 aa20.74■□□□□ 0.91
TPM1-208ENST00000404484 ATP5F1P24539 256 aaPredicted RBP20.74■□□□□ 0.91
TPM1-208ENST00000404484 AKT1P31749 480 aa20.74■□□□□ 0.91
TPM1-208ENST00000404484 RGS4P49798 205 aa20.74■□□□□ 0.91
TPM1-208ENST00000404484 CLCN7P51798 805 aa20.74■□□□□ 0.91
TPM1-208ENST00000404484 RPS14P62263 151 aaKnown RBP20.74■□□□□ 0.91
TPM1-208ENST00000404484 SFSWAPQ12872 951 aaKnown RBP20.74■□□□□ 0.91
TPM1-208ENST00000404484 TTLL9Q3SXZ7 439 aa20.74■□□□□ 0.91
TPM1-208ENST00000404484 SYT13Q7L8C5 426 aa20.74■□□□□ 0.91
TPM1-208ENST00000404484 SLC22A9Q8IVM8 553 aa20.74■□□□□ 0.91
TPM1-208ENST00000404484 ZBTB44Q8NCP5 570 aa20.74■□□□□ 0.91
TPM1-208ENST00000404484 DDHD1Q8NEL9 900 aa20.74■□□□□ 0.91
TPM1-208ENST00000404484 PPP4R1Q8TF05 950 aa20.74■□□□□ 0.91
TPM1-208ENST00000404484 FAM136AQ96C01 138 aa20.74■□□□□ 0.91
TPM1-208ENST00000404484 ZSCAN32Q9NX65 697 aa20.74■□□□□ 0.91
TPM1-208ENST00000404484 SCML1Q9UN30 329 aa20.74■□□□□ 0.91
TPM1-208ENST00000404484 GPR179Q6PRD1 2367 aa20.74■□□□□ 0.91
TPM1-208ENST00000404484 WDR87Q6ZQQ6 2873 aa20.73■□□□□ 0.91
TPM1-208ENST00000404484 MAGEC1O60732 1142 aa20.73■□□□□ 0.91
TPM1-208ENST00000404484 SBK3P0C264 359 aa20.73■□□□□ 0.91
TPM1-208ENST00000404484 CA5AP35218 305 aa20.73■□□□□ 0.91
TPM1-208ENST00000404484 DRD3P35462 400 aa20.73■□□□□ 0.91
TPM1-208ENST00000404484 OCRLQ01968 901 aa20.73■□□□□ 0.91
TPM1-208ENST00000404484 EOGTQ5NDL2 527 aa20.73■□□□□ 0.91
TPM1-208ENST00000404484 ISCA2Q86U28 154 aa20.73■□□□□ 0.91
TPM1-208ENST00000404484 CRLF3Q8IUI8 442 aa20.73■□□□□ 0.91
TPM1-208ENST00000404484 HDDC3Q8N4P3 179 aa20.73■□□□□ 0.91
TPM1-208ENST00000404484 SIDT2Q8NBJ9 832 aaKnown RBP20.73■□□□□ 0.91
TPM1-208ENST00000404484 TXNDC5Q8NBS9 432 aaKnown RBP20.73■□□□□ 0.91
TPM1-208ENST00000404484 BTN2A2Q8WVV5 523 aa20.73■□□□□ 0.91
TPM1-208ENST00000404484 PDLIM5Q96HC4 596 aaKnown RBP20.73■□□□□ 0.91
TPM1-208ENST00000404484 FAM126AQ9BYI3 521 aaPredicted RBP20.73■□□□□ 0.91
TPM1-208ENST00000404484 SARS2Q9NP81 518 aaKnown RBP20.73■□□□□ 0.91
TPM1-208ENST00000404484 SPATS2LQ9NUQ6 558 aaKnown RBP20.73■□□□□ 0.91
TPM1-208ENST00000404484 PLXNB3Q9ULL4 1909 aa20.73■□□□□ 0.91
TPM1-208ENST00000404484 PROB1E7EW31 1015 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 PLK4O00444 970 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 SMIM24O75264 130 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 RECQL5O94762 991 aaPredicted RBP20.72■□□□□ 0.91
TPM1-208ENST00000404484 DNTTP04053 509 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 MSH3P20585 1137 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 COPAP53621 1224 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 DNAJB13P59910 316 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 ZBTB16Q05516 673 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 DPTQ07507 201 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 AGBL4Q5VU57 503 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 ZCCHC23Q6ZST2 131 aa20.72■□□□□ 0.91
TPM1-208ENST00000404484 PHYKPLQ8IUZ5 450 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms