RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 GPR26Q8NDV2 337 aa11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 LPCAT1Q8NF37 534 aa11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 MAML1Q92585 1016 aa11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 C5orf34Q96MH7 638 aa11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 SMAD5Q99717 465 aaKnown RBP11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 RAB33BQ9H082 229 aa11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 FGF21Q9NSA1 209 aa11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 PCDHGB7Q9Y5F8 929 aa11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 SPG11Q96JI7 2443 aa11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 C1orf232A0A0U1RR37 186 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ARHGAP10A1A4S6 786 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ANKUB1A6NFN9 424 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 PDZK1P1A8MUH7 402 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 PRPSAP2O60256 369 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 TMEM63AO94886 807 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 LCA5LO95447 670 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 HLA-DQB2P05538 268 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 CD48P09326 243 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 RARAP10276 462 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 CDH6P55285 790 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 RPS15P62841 145 aaKnown RBP11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ITKQ08881 620 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ABRQ12979 859 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 MMRN1Q13201 1228 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 TDRD12Q587J7 1177 aaKnown RBP11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ZRANB3Q5FWF4 1079 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 IZUMO3Q5VZ72 239 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ALS2CLQ60I27 953 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 TMCO3Q6UWJ1 677 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 TRIM48Q8IWZ4 208 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 SIDT2Q8NBJ9 832 aaKnown RBP11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 MR1Q95460 341 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 MARVELD3Q96A59 401 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ZNF501Q96CX3 271 aaPredicted RBP11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ZDHHC12Q96GR4 267 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ZNF514Q96K75 400 aaPredicted RBP11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 FCRL4Q96PJ5 515 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 MLPHQ9BV36 600 aaPredicted RBP11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 SLC29A3Q9BZD2 475 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ZBTB20Q9HC78 741 aaPredicted RBP11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 PCDH18Q9HCL0 1135 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 TRIM39Q9HCM9 518 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 PDE7BQ9NP56 450 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 POT1Q9NUX5 634 aa11.65□□□□□ -0.54
SPTLC1P3-201ENST00000403408 SSU72P8A0A1W2PR75 194 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 H3BRJ5 948 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 MFSD11O43934 449 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 JCHAINP01591 159 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 PIRTP0C851 137 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 RORAP35398 523 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 EPHB1P54762 984 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ATP1A4Q13733 1029 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ZNF789Q5FWF6 425 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 AGAP9Q5VTM2 703 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 E4F1Q66K89 784 aaPredicted RBP11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 FAM198BQ6UWH4 519 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 WASH2PQ6VEQ5 465 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 FAM83HQ6ZRV2 1179 aaPredicted RBP11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 CPNE8Q86YQ8 564 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 RHOT1Q8IXI2 618 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 RAVER1Q8IY67 606 aaKnown RBP11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 D2HGDHQ8N465 521 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 AVL9Q8NBF6 648 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 TTC13Q8NBP0 860 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 HSPH1Q92598 858 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 POLR1EQ9GZS1 481 aaKnown RBP11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 CLSTN2Q9H4D0 955 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ZWILCHQ9H900 591 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 PCDH9Q9HC56 1237 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 WASH6PQ9NQA3 447 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 PARVAQ9NVD7 372 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 TCFL5Q9UL49 500 aa11.64□□□□□ -0.55
SPTLC1P3-201ENST00000403408 F5H423 210 aaPredicted RBP11.63□□□□□ -0.55
SPTLC1P3-201ENST00000403408 SCRG1O75711 98 aa11.63□□□□□ -0.55
SPTLC1P3-201ENST00000403408 SLC25A14O95258 325 aaPredicted RBP11.63□□□□□ -0.55
SPTLC1P3-201ENST00000403408 FECHP22830 423 aa11.63□□□□□ -0.55
SPTLC1P3-201ENST00000403408 FOXL2P58012 376 aa11.63□□□□□ -0.55
SPTLC1P3-201ENST00000403408 INSCQ1MX18 579 aa11.63□□□□□ -0.55
SPTLC1P3-201ENST00000403408 SPOCD1Q6ZMY3 1216 aa11.63□□□□□ -0.55
SPTLC1P3-201ENST00000403408 APTXQ7Z2E3 356 aaKnown RBP11.63□□□□□ -0.55
SPTLC1P3-201ENST00000403408 CUZD1Q86UP6 607 aa11.63□□□□□ -0.55
SPTLC1P3-201ENST00000403408 DSELQ8IZU8 1212 aa11.63□□□□□ -0.55
SPTLC1P3-201ENST00000403408 BBS5Q8N3I7 341 aa11.63□□□□□ -0.55
SPTLC1P3-201ENST00000403408 SEC14L1Q92503 715 aa11.63□□□□□ -0.55
SPTLC1P3-201ENST00000403408 UBXN4Q92575 508 aa11.63□□□□□ -0.55
SPTLC1P3-201ENST00000403408 GLYATL1Q969I3 302 aa11.63□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ZNF653Q96CK0 615 aa11.63□□□□□ -0.55
SPTLC1P3-201ENST00000403408 NRTNQ99748 197 aa11.63□□□□□ -0.55
SPTLC1P3-201ENST00000403408 TIMM29Q9BSF4 260 aa11.63□□□□□ -0.55
SPTLC1P3-201ENST00000403408 SPATA16Q9BXB7 569 aa11.63□□□□□ -0.55
SPTLC1P3-201ENST00000403408 RBM22Q9NW64 420 aaKnown RBP eCLIP11.63□□□□□ -0.55
SPTLC1P3-201ENST00000403408 GPR83Q9NYM4 423 aa11.63□□□□□ -0.55
SPTLC1P3-201ENST00000403408 CSAG2Q9Y5P2 127 aa11.63□□□□□ -0.55
SPTLC1P3-201ENST00000403408 RGSL1A5PLK6 1076 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 ANKRD66B4E2M5 251 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 MEN1O00255 615 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 E2F3O00716 465 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 AURKAO14965 403 aa11.62□□□□□ -0.55
SPTLC1P3-201ENST00000403408 KMOO15229 486 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms