RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 SLC44A3Q8N4M1 653 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 PCYOX1LQ8NBM8 494 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 UHRF1Q96T88 793 aaPredicted RBP15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 BBS2Q9BXC9 721 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 HPS4Q9NQG7 708 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 MTF2Q9Y483 593 aaPredicted RBP15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 PRORSD1PA6NEY8 169 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ADH1CP00326 375 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 FGF1P05230 155 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 TFAP2AP05549 437 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ARSAP15289 507 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 CD1DP15813 335 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ZNF26P17031 533 aaPredicted RBP15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 HLA-DPA1P20036 260 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 OR1E1P30953 314 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 GDI1P31150 447 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 MAPKAPK2P49137 400 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 SUOXP51687 545 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 MAP7Q14244 749 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 IHHQ14623 411 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ADRM1Q16186 407 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 CLEC6AQ6EIG7 209 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 MRNIPQ6NTE8 343 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 CYHR1Q6ZMK1 362 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ADHFE1Q8IWW8 467 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 FEM1CQ96JP0 617 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ZNF597Q96LX8 424 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 PCDHAC1Q9H158 963 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 RIMKLBQ9ULI2 386 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.77■□□□□ 0.12
CHRFAM7A-203ENST00000401522 OTOL1A6NHN0 477 aaPredicted RBP15.77■□□□□ 0.12
CHRFAM7A-203ENST00000401522 HOXC11O43248 304 aaPredicted RBP15.77■□□□□ 0.12
CHRFAM7A-203ENST00000401522 RAMP2O60895 175 aa15.77■□□□□ 0.12
CHRFAM7A-203ENST00000401522 EPOP01588 193 aa15.77■□□□□ 0.12
CHRFAM7A-203ENST00000401522 FGF4P08620 206 aa15.77■□□□□ 0.12
CHRFAM7A-203ENST00000401522 TYRP14679 529 aa15.77■□□□□ 0.12
CHRFAM7A-203ENST00000401522 GPX3P22352 226 aa15.77■□□□□ 0.12
CHRFAM7A-203ENST00000401522 KCNC1P48547 511 aa15.77■□□□□ 0.12
CHRFAM7A-203ENST00000401522 RALGDSQ12967 914 aa15.77■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ZNF177Q13360 481 aaPredicted RBP15.77■□□□□ 0.12
CHRFAM7A-203ENST00000401522 RUNX3Q13761 415 aa15.77■□□□□ 0.12
CHRFAM7A-203ENST00000401522 APOFQ13790 326 aa15.77■□□□□ 0.12
CHRFAM7A-203ENST00000401522 POLD3Q15054 466 aaPredicted RBP15.77■□□□□ 0.12
CHRFAM7A-203ENST00000401522 UGT3A2Q3SY77 523 aa15.77■□□□□ 0.12
CHRFAM7A-203ENST00000401522 PRMT9Q6P2P2 845 aa15.77■□□□□ 0.12
CHRFAM7A-203ENST00000401522 LDB1Q86U70 411 aaPredicted RBP15.77■□□□□ 0.12
CHRFAM7A-203ENST00000401522 PIM3Q86V86 326 aa15.77■□□□□ 0.12
CHRFAM7A-203ENST00000401522 PGBD5Q8N414 524 aa15.77■□□□□ 0.12
CHRFAM7A-203ENST00000401522 BHMTQ93088 406 aa15.77■□□□□ 0.12
CHRFAM7A-203ENST00000401522 PTERQ96BW5 349 aa15.77■□□□□ 0.12
CHRFAM7A-203ENST00000401522 OSBPL11Q9BXB4 747 aa15.77■□□□□ 0.12
CHRFAM7A-203ENST00000401522 PTTG2Q9NZH5 202 aa15.77■□□□□ 0.12
CHRFAM7A-203ENST00000401522 MIA3Q5JRA6 1907 aa15.77■□□□□ 0.11
CHRFAM7A-203ENST00000401522 OR51F1A6NGY5 319 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 NEDD8-MDP1E9PL57 170 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 CCL22O00626 93 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 CD3EAPO15446 510 aaKnown RBP15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 RPP40O75818 363 aaKnown RBP15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 ADH5P11766 374 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 OGNP20774 298 aaKnown RBP15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 YBEYP58557 167 aaPredicted RBP15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 SERINC3Q13530 473 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 MAP7D1Q3KQU3 841 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 C6orf10Q5SRN2 563 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 CPA6Q8N4T0 437 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 RHEBL1Q8TAI7 183 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 FIBINQ8TAL6 211 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 POLR1EQ9GZS1 481 aaKnown RBP15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 TRPV5Q9NQA5 729 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 POLR3BQ9NW08 1133 aaPredicted RBP15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 APPL1Q9UKG1 709 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 CRYL1Q9Y2S2 319 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 KCTD3Q9Y597 815 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 H0Y626 953 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 GOT2P00505 430 aaKnown RBP15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 SLC4A1P02730 911 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 ETS2P15036 469 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 ZP2Q05996 745 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 CXorf57Q6NSI4 855 aaKnown RBP15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 ZNF549Q6P9A3 640 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 DHFR2Q86XF0 187 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 SPNS2Q8IVW8 549 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 CHERPQ8IWX8 916 aaKnown RBP15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 CARNMT1Q8N4J0 409 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 PTGR2Q8N8N7 351 aaPredicted RBP15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 ZNF557Q8N988 423 aaPredicted RBP15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 OR52K2Q8NGK3 314 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 LRTOMTQ8WZ04 291 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 SLCO4A1Q96BD0 722 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 DTNBP1Q96EV8 351 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 TBATAQ96M53 351 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 SEMA3CQ99985 751 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 HOPXQ9BPY8 73 aaPredicted RBP15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 TRIM15Q9C019 465 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 TFB2MQ9H5Q4 396 aaKnown RBP15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 COQ10BQ9H8M1 238 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 BRD9Q9H8M2 597 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 AKTIPQ9H8T0 292 aa15.76■□□□□ 0.11
CHRFAM7A-203ENST00000401522 FBXO10Q9UK96 956 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms