RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 CCDC97Q96F63 343 aaPredicted RBP12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 RPF2Q9H7B2 306 aaKnown RBP12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 MRM3Q9HC36 420 aaKnown RBP12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 SMPD3Q9NY59 655 aaPredicted RBP12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 CD300AQ9UGN4 299 aa12.53□□□□□ -0.4
PPP4R1-202ENST00000400555 TNS1Q9HBL0 1735 aaKnown RBP12.52□□□□□ -0.4
PPP4R1-202ENST00000400555 M0QZQ0 153 aa12.52□□□□□ -0.4
PPP4R1-202ENST00000400555 ARVCFO00192 962 aa12.52□□□□□ -0.4
PPP4R1-202ENST00000400555 KERAO60938 352 aa12.52□□□□□ -0.4
PPP4R1-202ENST00000400555 ATN1P54259 1190 aaPredicted RBP12.52□□□□□ -0.4
PPP4R1-202ENST00000400555 PMS2P3Q13401 168 aa12.52□□□□□ -0.4
PPP4R1-202ENST00000400555 CDH18Q13634 790 aa12.52□□□□□ -0.4
PPP4R1-202ENST00000400555 ADRM1Q16186 407 aa12.52□□□□□ -0.4
PPP4R1-202ENST00000400555 UGT3A2Q3SY77 523 aa12.52□□□□□ -0.4
PPP4R1-202ENST00000400555 FAM174BQ3ZCQ3 159 aa12.52□□□□□ -0.4
PPP4R1-202ENST00000400555 AFTPHQ6ULP2 937 aa12.52□□□□□ -0.4
PPP4R1-202ENST00000400555 SLC24A5Q71RS6 500 aa12.52□□□□□ -0.4
PPP4R1-202ENST00000400555 DBF4BQ8NFT6 615 aa12.52□□□□□ -0.4
PPP4R1-202ENST00000400555 OR2T11Q8NH01 316 aa12.52□□□□□ -0.4
PPP4R1-202ENST00000400555 PNPT1Q8TCS8 783 aaKnown RBP12.52□□□□□ -0.4
PPP4R1-202ENST00000400555 ATOH8Q96SQ7 321 aa12.52□□□□□ -0.4
PPP4R1-202ENST00000400555 BDH2Q9BUT1 245 aa12.52□□□□□ -0.4
PPP4R1-202ENST00000400555 TNKS2Q9H2K2 1166 aa12.52□□□□□ -0.4
PPP4R1-202ENST00000400555 FANCEQ9HB96 536 aa12.52□□□□□ -0.4
PPP4R1-202ENST00000400555 FARSBQ9NSD9 589 aaKnown RBP12.52□□□□□ -0.4
PPP4R1-202ENST00000400555 A0A1W2PP18 115 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 CACNG3O60359 315 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 DFNA5O60443 496 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 PRAMEF11O60813 436 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 MTHFRP42898 656 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 SPIDRQ14159 915 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 ANKDD1AQ495B1 522 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 BLOC1S3Q6QNY0 202 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 UTS2BQ765I0 119 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 TAS1R1Q7RTX1 841 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 GALNT10Q86SR1 603 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 RASAL3Q86YV0 1011 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 KIAA1191Q96A73 305 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 BOCQ9BWV1 1114 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 DPY30Q9C005 99 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 TFB2MQ9H5Q4 396 aaKnown RBP12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 DUS2Q9NX74 493 aaKnown RBP12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 AGRPO00253 132 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 ACSL4O60488 711 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 DIRAS1O95057 198 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 MBL2P11226 248 aaPredicted RBP12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 ZNF182P17025 639 aaPredicted RBP12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 SGSHP51688 502 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 NEK2P51955 445 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 HSPA14Q0VDF9 509 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 GTDC1Q4AE62 458 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 FGD3Q5JSP0 725 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 PPP4R4Q6NUP7 873 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 PRMT9Q6P2P2 845 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 TBPL2Q6SJ96 375 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 LYSMD3Q7Z3D4 306 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 RTN4RL1Q86UN2 441 aaPredicted RBP12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 TICAM1Q8IUC6 712 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 ADGRG5Q8IZF4 528 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 SGCDQ92629 289 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 FEM1CQ96JP0 617 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 ACTR8Q9H981 624 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 TLR9Q9NR96 1032 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 ACTR3BQ9P1U1 418 aa12.52□□□□□ -0.41
PPP4R1-202ENST00000400555 MROH6A6NGR9 719 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 ADAM12O43184 909 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 TBL1XO60907 577 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 CST1P01037 141 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 ERVPABLB-1P60509 514 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 POM121L1PQ3SYA9 428 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 RTP2Q5QGT7 225 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 LETMD1Q6P1Q0 360 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 RSPO2Q6UXX9 243 aaPredicted RBP12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 ZDHHC13Q8IUH4 622 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 EPHX4Q8IUS5 362 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 KIAA2013Q8IYS2 634 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 NKAPQ8N5F7 415 aaKnown RBP12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 KRTCAP2Q8N6L1 136 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 OR4F6Q8NGB9 312 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 GIPC3Q8TF64 312 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 ADGRE3Q9BY15 652 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 ADGRE2Q9UHX3 823 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 SLC25A14O95258 325 aaPredicted RBP12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 PRAMEF12O95522 483 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 MZF1P28698 734 aaPredicted RBP12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 CASP9P55211 416 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 NAA20P61599 178 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 BNIP2Q12982 314 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 TGFBIQ15582 683 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 MAPKAPK3Q16644 382 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 RFTN2Q52LD8 501 aaPredicted RBP12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 TMTC4Q5T4D3 741 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 TFAP2CQ92754 450 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 DPF3Q92784 378 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 ISOC1Q96CN7 298 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 SLC39A13Q96H72 371 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 BEGAINQ9BUH8 593 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 ARNT2Q9HBZ2 717 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 DNMT3LQ9UJW3 386 aa12.51□□□□□ -0.41
PPP4R1-202ENST00000400555 INVSQ9Y283 1065 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms