RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 SPARTQ8N0X7 666 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 RBM15BQ8NDT2 890 aaKnown RBP6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 REPS2Q8NFH8 660 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 JOSD2Q8TAC2 188 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 FBXW5Q969U6 566 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 TP63Q9H3D4 680 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 HIPK3Q9H422 1215 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 SMURF2Q9HAU4 748 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 INTS9Q9NV88 658 aaKnown RBP6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 RUVBL1Q9Y265 456 aaKnown RBP6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 BTBD3Q9Y2F9 522 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 PHIPQ8WWQ0 1821 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 LOC100506127A0A0U1RQW1 187 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 TMEM120BA0PK00 339 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 TNPO2O14787 897 aaKnown RBP6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 PCDH17O14917 1159 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 CLPTM1O96005 669 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 NTRK1P04629 796 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 UROSP10746 265 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 ATF2P15336 505 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 ADRA1DP25100 572 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 NUP62P37198 522 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 OAZ1P54368 228 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 NOMO3P69849 1222 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 ATP11AP98196 1134 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 MMRN1Q13201 1228 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 CYLC2Q14093 348 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 ZMYND11Q15326 602 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 STXBP2Q15833 593 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 WDR72Q3MJ13 1102 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 SGO1Q5FBB7 561 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 NOMO2Q5JPE7 1267 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 NOL9Q5SY16 702 aaKnown RBP6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 ATAD3BQ5T9A4 648 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 PRAMEF20Q5VT98 475 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 TMEM214Q6NUQ4 689 aaKnown RBP6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 RBPMS2Q6ZRY4 209 aaKnown RBP6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 ZC3H18Q86VM9 953 aaKnown RBP6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 TPRA1Q86W33 373 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 SPNS2Q8IVW8 549 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 SLC15A4Q8N697 577 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 C12orf29Q8N999 325 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 OR14C36Q8NHC7 312 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 MAIP1Q8WWC4 291 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 KIFAP3Q92845 792 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 CD101Q93033 1021 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 PPP1R10Q96QC0 940 aaKnown RBP6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 XPO6Q96QU8 1125 aaKnown RBP6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 PIP5K1AQ99755 562 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 SF3B5Q9BWJ5 86 aaKnown RBP6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 TBC1D10AQ9BXI6 508 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 FAM49AQ9H0Q0 323 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 SMYD3Q9H7B4 428 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 MBD2Q9UBB5 411 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 TRPS1Q9UHF7 1281 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 ATXN7L1Q9ULK2 861 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 KCNE2Q9Y6J6 123 aa6.18□□□□□ -1.42
TRAPPC13-202ENST00000399438 C5orf51A6NDU8 294 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 A8MUI8 341 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 CHEK2O96017 543 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 NFICP08651 508 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 ERVK-10P10266 1014 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 ANPEPP15144 967 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 PCGF2P35227 344 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 C10orf120Q5SQS8 335 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 CACHD1Q5VU97 1274 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 BEND4Q6ZU67 534 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 CCDC121Q6ZUS5 278 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 CHST9Q7L1S5 443 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 KCTD9Q7L273 389 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 EXOC3L1Q86VI1 746 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 MREGQ8N565 214 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 C3orf20Q8ND61 904 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 TCP11Q8WWU5 503 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 ZFRQ96KR1 1074 aaKnown RBP6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 DGAT2Q96PD7 388 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 OSBPL8Q9BZF1 889 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 RMND5AQ9H871 391 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 ZNF395Q9H8N7 513 aaPredicted RBP6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 LRRC40Q9H9A6 602 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 FAM49BQ9NUQ9 324 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 KCND2Q9NZV8 630 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 CYTH4Q9UIA0 394 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 KCND3Q9UK17 655 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 ERVK-19Q9WJR5 959 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 CFL2Q9Y281 166 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 PCDHA3Q9Y5H8 950 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 MEFVO15553 781 aaPredicted RBP6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 TRAPPC3O43617 180 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 PEX1O43933 1283 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 RPS6KA5O75582 802 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 FAM107AO95990 144 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 C4BPAP04003 597 aaKnown RBP6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 THBDP07204 575 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 GSTP1P09211 210 aaKnown RBP6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 UNGP13051 313 aaPredicted RBP6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 POU2F1P14859 743 aa6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 ACO1P21399 889 aaKnown RBP6.17□□□□□ -1.42
TRAPPC13-202ENST00000399438 SFNP31947 248 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms