RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 AGTR2P50052 363 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 FPGSQ05932 587 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 MAPRE1Q15691 268 aaKnown RBP13.84□□□□□ -0.19
APOB-202ENST00000399256 CARTPTQ16568 116 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 AAK1Q2M2I8 961 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 AGAP7PQ5VUJ5 663 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 SULT1C3Q6IMI6 304 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 TIGD7Q6NT04 549 aaPredicted RBP13.84□□□□□ -0.19
APOB-202ENST00000399256 SCML4Q8N228 414 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 ZCCHC7Q8N3Z6 543 aaKnown RBP13.84□□□□□ -0.19
APOB-202ENST00000399256 TSPEARQ8WU66 669 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 SLC10A4Q96EP9 437 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 CYP2S1Q96SQ9 504 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 ALOXE3Q9BYJ1 711 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 SLC25A51Q9H1U9 297 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 CATSPERBQ9H7T0 1116 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 POU2F3Q9UKI9 436 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 ZBBXA8MT70 800 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 SLC1A7O00341 560 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 XPNPEP2O43895 674 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 TULP3O75386 442 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 SOAT2O75908 522 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 PRSS23O95084 383 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 PRR35P0CG20 571 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 PRKACGP22612 351 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 TPTEP56180 551 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 PHKG1Q16816 387 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 UGT3A1Q6NUS8 523 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 SPESP1Q6UW49 350 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 FNDC5Q8NAU1 212 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 PPP1R2P1Q96PQ5 205 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 SPATA7Q9P0W8 599 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 ASB14A6NK59 587 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 ZNF99A8MXY4 864 aaPredicted RBP13.84□□□□□ -0.19
APOB-202ENST00000399256 GNGT2O14610 69 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 PFDN6O15212 129 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 GMNNO75496 209 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 GOT2P00505 430 aaKnown RBP13.84□□□□□ -0.19
APOB-202ENST00000399256 CST1P01037 141 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 ALOX5P09917 674 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 PCMT1P22061 227 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 VBP1P61758 197 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 FKBP1BP68106 108 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 RBBP7Q16576 425 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 NKG7Q16617 165 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 ADPRMQ3LIE5 342 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 C14orf80Q86SX3 495 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 MFSD4AQ8N468 514 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 CNIH3Q8TBE1 160 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 PROKR1Q8TCW9 393 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 ISG20Q96AZ6 181 aaKnown RBP13.84□□□□□ -0.19
APOB-202ENST00000399256 SIAEQ9HAT2 523 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 ARNT2Q9HBZ2 717 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 FAM50BQ9Y247 325 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 IPPQ9Y573 584 aa13.84□□□□□ -0.19
APOB-202ENST00000399256 J3KR12 359 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 HS6ST1O60243 411 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 CELF2O95319 508 aaKnown RBP13.83□□□□□ -0.2
APOB-202ENST00000399256 DGKQP52824 942 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 GABARAPL2P60520 117 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 TSNQ15631 228 aaKnown RBP13.83□□□□□ -0.2
APOB-202ENST00000399256 SIRPB2Q5JXA9 342 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 UBXN11Q5T124 520 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 C6orf183Q5T699 404 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 DEPDC1Q5TB30 811 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 ANKS6Q68DC2 871 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 ADCK1Q86TW2 530 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 SLC22A16Q86VW1 577 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 S100ZQ8WXG8 99 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 IMP4Q96G21 291 aaKnown RBP13.83□□□□□ -0.2
APOB-202ENST00000399256 ITCHQ96J02 903 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 TMEM209Q96SK2 561 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 HBEGFQ99075 208 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 COMMD8Q9NX08 183 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 ZNF225Q9UK10 706 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 ARL5AQ9Y689 179 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 FAM234BA2RU67 622 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 MROH6A6NGR9 719 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 PTGESO14684 152 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 ECI2O75521 394 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 GJB3O75712 270 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 GLP2RO95838 553 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 PIRTP0C851 137 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 ITIH1P19827 911 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 PCYT1AP49585 367 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 SLC10A7Q0GE19 358 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 PLEKHG7Q6ZR37 379 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 SCAMP5Q8TAC9 235 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 FRS2Q8WU20 508 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 BTN2A3PQ96KV6 586 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 OSBPL10Q9BXB5 764 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 BRINP2Q9C0B6 783 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 ATP13A1Q9HD20 1204 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 AASSQ9UDR5 926 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 ZNF229Q9UJW7 825 aa13.83□□□□□ -0.2
APOB-202ENST00000399256 UBA6A0AVT1 1052 aaPredicted RBP13.82□□□□□ -0.2
APOB-202ENST00000399256 CCDC162PA2VCL2 907 aa13.82□□□□□ -0.2
APOB-202ENST00000399256 CD3EAPO15446 510 aaKnown RBP13.82□□□□□ -0.2
APOB-202ENST00000399256 FGF10O15520 208 aaPredicted RBP13.82□□□□□ -0.2
APOB-202ENST00000399256 PAPSS2O95340 614 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms