RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 TNRC6AQ8NDV7 1962 aaKnown RBP11.81□□□□□ -0.52
TFF3-202ENST00000398431 IGHV5-51A0A0C4DH38 117 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 BLACEA4D250 179 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 CDC14CA4D256 554 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 PDZK1P1A8MUH7 402 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 GOLGA6L6A8MZA4 724 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 MKRN2OSH3BPM6 223 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 VEGFDO43915 354 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 ZNF500O60304 480 aaPredicted RBP11.81□□□□□ -0.52
TFF3-202ENST00000398431 MT-CYBP00156 380 aaPredicted RBP11.81□□□□□ -0.52
TFF3-202ENST00000398431 SERPINC1P01008 464 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 KRT7P08729 469 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 FOLR1P15328 257 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 IDSP22304 550 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 CAPZBP47756 277 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 TERF1P54274 439 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 FANCCQ00597 558 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 CDK18Q07002 472 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 TMEM115Q12893 351 aaPredicted RBP11.81□□□□□ -0.52
TFF3-202ENST00000398431 SEMA5AQ13591 1074 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 DNASE1L3Q13609 305 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 LAMB3Q13751 1172 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 PCSK7Q16549 785 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 ATP13A5Q4VNC0 1218 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 SLC9A4Q6AI14 798 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 PWWP2BQ6NUJ5 590 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 NPNTQ6UXI9 565 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 CERS6Q6ZMG9 384 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 FAM92BQ6ZTR7 304 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 ASB18Q6ZVZ8 466 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 B4GALNT4Q76KP1 1039 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 APLFQ8IW19 511 aaPredicted RBP11.81□□□□□ -0.52
TFF3-202ENST00000398431 TRIM48Q8IWZ4 208 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 TEX19Q8NA77 164 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 CT55Q8WUE5 264 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 STAMBPL1Q96FJ0 436 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 SLC41A2Q96JW4 573 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 AGAP3Q96P47 875 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 OLFM3Q96PB7 478 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 VPS35Q96QK1 796 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 TRIM55Q9BYV6 548 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 GPR63Q9BZJ6 419 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 SLC25A51Q9H1U9 297 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 BPIFA1Q9NP55 256 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 RAD18Q9NS91 495 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 CTTNBP2NLQ9P2B4 639 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 UVRAGQ9P2Y5 699 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 TRIM10Q9UDY6 481 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 KCND3Q9UK17 655 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 ZKSCAN5Q9Y2L8 839 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 HEY1Q9Y5J3 304 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 ICE1Q9Y2F5 2266 aa11.81□□□□□ -0.52
TFF3-202ENST00000398431 PIPSLA2A3N6 862 aa11.8□□□□□ -0.52
TFF3-202ENST00000398431 GOLGA6L19H0YKK7 550 aa11.8□□□□□ -0.52
TFF3-202ENST00000398431 RFPL1O75677 317 aa11.8□□□□□ -0.52
TFF3-202ENST00000398431 RASSF9O75901 435 aa11.8□□□□□ -0.52
TFF3-202ENST00000398431 DNAJB5O75953 348 aa11.8□□□□□ -0.52
TFF3-202ENST00000398431 MTA2O94776 668 aa11.8□□□□□ -0.52
TFF3-202ENST00000398431 NDST3O95803 873 aa11.8□□□□□ -0.52
TFF3-202ENST00000398431 NTRK1P04629 796 aa11.8□□□□□ -0.52
TFF3-202ENST00000398431 GYPCP04921 128 aa11.8□□□□□ -0.52
TFF3-202ENST00000398431 CCNYL3P0C7X3 344 aa11.8□□□□□ -0.52
TFF3-202ENST00000398431 PMS2P54278 862 aa11.8□□□□□ -0.52
TFF3-202ENST00000398431 AP1B1Q10567 949 aa11.8□□□□□ -0.52
TFF3-202ENST00000398431 KCNAB1Q14722 419 aa11.8□□□□□ -0.52
TFF3-202ENST00000398431 ASTE1Q2TB18 679 aaPredicted RBP11.8□□□□□ -0.52
TFF3-202ENST00000398431 IRGCQ6NXR0 463 aa11.8□□□□□ -0.52
TFF3-202ENST00000398431 FAM199XQ6PEV8 388 aaPredicted RBP11.8□□□□□ -0.52
TFF3-202ENST00000398431 PPP1R3BQ86XI6 285 aa11.8□□□□□ -0.52
TFF3-202ENST00000398431 RBM12BQ8IXT5 1001 aaKnown RBP11.8□□□□□ -0.52
TFF3-202ENST00000398431 ZDHHC12Q96GR4 267 aa11.8□□□□□ -0.52
TFF3-202ENST00000398431 FCRL4Q96PJ5 515 aa11.8□□□□□ -0.52
TFF3-202ENST00000398431 TWSG1Q9GZX9 223 aa11.8□□□□□ -0.52
TFF3-202ENST00000398431 GLOD4Q9HC38 313 aa11.8□□□□□ -0.52
TFF3-202ENST00000398431 LNPEPQ9UIQ6 1025 aa11.8□□□□□ -0.52
TFF3-202ENST00000398431 UTP20O75691 2785 aaKnown RBP11.79□□□□□ -0.52
TFF3-202ENST00000398431 ZNF487B1APH4 448 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 UGT1A9O60656 530 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 SLC4A1P02730 911 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 H2AFZP0C0S5 128 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 UGT1A6P19224 532 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 UGT1A1P22309 533 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 UGT1A4P22310 534 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 FECHP22830 423 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 HNRNPH3P31942 346 aaKnown RBP11.79□□□□□ -0.52
TFF3-202ENST00000398431 CD68P34810 354 aaPredicted RBP11.79□□□□□ -0.52
TFF3-202ENST00000398431 HMGCLP35914 325 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 NOP2P46087 812 aaKnown RBP11.79□□□□□ -0.52
TFF3-202ENST00000398431 UQCRFS1P47985 274 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 UBASH3AP57075 661 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 DMPKQ09013 629 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 PDK1Q15118 436 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 SLC14A2Q15849 920 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 RPE65Q16518 533 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 TEX44Q53QW1 395 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 HIST2H2BCQ6DN03 193 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 FAM83HQ6ZRV2 1179 aaPredicted RBP11.79□□□□□ -0.52
TFF3-202ENST00000398431 H2AFVQ71UI9 128 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 TTC30BQ8N4P2 665 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 RASGEF1AQ8N9B8 481 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms