RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 ROR1Q01973 937 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 CRYZQ08257 329 aaKnown RBP2.7□□□□□ -1.98
CD47-203ENST00000398258 TRAF3Q13114 568 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 CTF1Q16619 201 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 CBWD6Q4V339 395 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 ATP13A5Q4VNC0 1218 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 KRTCAP3Q53RY4 240 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 CBWD3Q5JTY5 395 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 ZNF324BQ6AW86 544 aaPredicted RBP2.7□□□□□ -1.98
CD47-203ENST00000398258 FAM122CQ6P4D5 195 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 SLC36A4Q6YBV0 504 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 RBPMS2Q6ZRY4 209 aaKnown RBP2.7□□□□□ -1.98
CD47-203ENST00000398258 INTS8Q75QN2 995 aaKnown RBP2.7□□□□□ -1.98
CD47-203ENST00000398258 ZNF534Q76KX8 674 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.7□□□□□ -1.98
CD47-203ENST00000398258 LDB1Q86U70 411 aaPredicted RBP2.7□□□□□ -1.98
CD47-203ENST00000398258 CEP57Q86XR8 500 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 RASGEF1CQ8N431 466 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 ZNF114Q8NC26 417 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 APPL2Q8NEU8 664 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 SPATA22Q8NHS9 363 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 TAS1R2Q8TE23 839 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 RND1Q92730 232 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 ORAI1Q96D31 301 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 PHF21BQ96EK2 531 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 RADILQ96JH8 1075 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 ZMAT2Q96NC0 199 aaKnown RBP2.7□□□□□ -1.98
CD47-203ENST00000398258 NEK1Q96PY6 1258 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 KXD1Q9BQD3 176 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 NTPCRQ9BSD7 190 aaKnown RBP2.7□□□□□ -1.98
CD47-203ENST00000398258 AP1M1Q9BXS5 423 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 KLHL4Q9C0H6 718 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 ZCCHC17Q9NP64 241 aaKnown RBP2.7□□□□□ -1.98
CD47-203ENST00000398258 CCDC177Q9NQR7 707 aaPredicted RBP2.7□□□□□ -1.98
CD47-203ENST00000398258 TMEM30AQ9NV96 361 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 TAB2Q9NYJ8 693 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 RCC2Q9P258 522 aaKnown RBP2.7□□□□□ -1.98
CD47-203ENST00000398258 LARSQ9P2J5 1176 aaKnown RBP2.7□□□□□ -1.98
CD47-203ENST00000398258 PPIEQ9UNP9 301 aaKnown RBP2.7□□□□□ -1.98
CD47-203ENST00000398258 TRPV2Q9Y5S1 764 aa2.7□□□□□ -1.98
CD47-203ENST00000398258 A0A1W2PRQ8 180 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 TRBC2A0A5B9 178 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 LILRA5A6NI73 299 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 A6NL46 340 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 SOCS6O14544 535 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 DVL1O14640 695 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 ANKRD28O15084 1053 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 PLPP2O43688 288 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 SERPINI2O75830 405 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 PSMD10O75832 226 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 QDPRP09417 244 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 S1PR1P21453 382 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 ITGB8P26012 769 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 C21orf33P30042 268 aaPredicted RBP2.69□□□□□ -1.98
CD47-203ENST00000398258 KCNJ4P48050 445 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 CCR3P51677 355 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 ZNF41P51814 821 aaPredicted RBP2.69□□□□□ -1.98
CD47-203ENST00000398258 CLDN20P56880 219 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 UBXN2AP68543 259 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 EGR4Q05215 589 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 DHX34Q14147 1143 aaKnown RBP2.69□□□□□ -1.98
CD47-203ENST00000398258 IL11RAQ14626 422 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 NFATC4Q14934 902 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 PSMD6Q15008 389 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 ASIC2Q16515 512 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 PAPPA-AS1Q5QFB9 102 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 TYW3Q6IPR3 259 aaKnown RBP2.69□□□□□ -1.98
CD47-203ENST00000398258 FAM198BQ6UWH4 519 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 HAUS6Q7Z4H7 955 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 PM20D2Q8IYS1 436 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 IQCF1Q8N6M8 205 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 EMC1Q8N766 993 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 XXYLT1Q8NBI6 393 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 ACVR1CQ8NER5 493 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 TSPAN14Q8NG11 270 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 OR5R1Q8NH85 324 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 OR14A16Q8NHC5 309 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 LPGAT1Q92604 370 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 TXNDC15Q96J42 360 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 CNDP2Q96KP4 475 aaKnown RBP2.69□□□□□ -1.98
CD47-203ENST00000398258 LRRC3BQ96PB8 259 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 IL25Q9H293 177 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 ANKZF1Q9H8Y5 726 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 HACL1Q9UJ83 578 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 FBXL2Q9UKC9 423 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 LOXL2Q9Y4K0 774 aa2.69□□□□□ -1.98
CD47-203ENST00000398258 PRAG1Q86YV5 1406 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 SRRM3A6NNA2 597 aaPredicted RBP2.68□□□□□ -1.98
CD47-203ENST00000398258 H3BQ06 376 aaPredicted RBP2.68□□□□□ -1.98
CD47-203ENST00000398258 HS3ST1O14792 307 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 KCNJ13O60928 360 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 TOMM70O94826 608 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 C22orf31O95567 290 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 DANCRP0C864 163 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 MYBL1P10243 752 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 ZNF12P17014 697 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 SSTR2P30874 369 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 CAPZA2P47755 286 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 PDLIM4P50479 330 aa2.68□□□□□ -1.98
CD47-203ENST00000398258 CTSCP53634 463 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms