RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 ACP5P13686 325 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 CD68P34810 354 aaPredicted RBP8.18□□□□□ -1.1
PTPRD-204ENST00000397606 HSD17B2P37059 387 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 CPA2P48052 419 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 ALDH9A1P49189 494 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 SEMA3BQ13214 749 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 NFYCQ13952 458 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 NAA25Q14CX7 972 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 SF1Q15637 639 aaKnown RBP8.18□□□□□ -1.1
PTPRD-204ENST00000397606 PAQR3Q6TCH7 311 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 SYT12Q8IV01 421 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 NRSN1Q8IZ57 195 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 BANPQ8N9N5 519 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 C2CD4AQ8NCU7 369 aaPredicted RBP8.18□□□□□ -1.1
PTPRD-204ENST00000397606 LCN9Q8WX39 176 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 HIC2Q96JB3 615 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 PKMYT1Q99640 499 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 ACAT2Q9BWD1 397 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 CPEB1Q9BZB8 566 aaKnown RBP8.18□□□□□ -1.1
PTPRD-204ENST00000397606 PCBD2Q9H0N5 130 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 RUBCNLQ9H714 662 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 NDOR1Q9UHB4 597 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 PSME2Q9UL46 239 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 SLC12A4Q9UP95 1085 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 SORCS3Q9UPU3 1222 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 FCHO1O14526 889 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 NOL3O60936 208 aaKnown RBP8.18□□□□□ -1.1
PTPRD-204ENST00000397606 POP7O75817 140 aaKnown RBP8.18□□□□□ -1.1
PTPRD-204ENST00000397606 PAK4O96013 591 aaPredicted RBP8.18□□□□□ -1.1
PTPRD-204ENST00000397606 TNFP01375 233 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 DNAJB1P25685 340 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 RGS1Q08116 209 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 PDE1CQ14123 709 aaPredicted RBP8.18□□□□□ -1.1
PTPRD-204ENST00000397606 FASTKQ14296 549 aaKnown RBP8.18□□□□□ -1.1
PTPRD-204ENST00000397606 CYP20A1Q6UW02 462 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 CUZD1Q86UP6 607 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 CHST14Q8NCH0 376 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 KCNJ9Q92806 393 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 C12orf66Q96MD2 445 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 OSBPL6Q9BZF3 934 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 ABCG4Q9H172 646 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 TMEM216Q9P0N5 145 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 PSMD13Q9UNM6 376 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 TRAF6Q9Y4K3 522 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 LIN7AO14910 233 aaPredicted RBP8.18□□□□□ -1.1
PTPRD-204ENST00000397606 SMAD6O43541 496 aaKnown RBP8.18□□□□□ -1.1
PTPRD-204ENST00000397606 CACNG3O60359 315 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 TSPAN8P19075 237 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 ITPKAP23677 461 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 IVDP26440 423 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 TLX1P31314 330 aaPredicted RBP8.18□□□□□ -1.1
PTPRD-204ENST00000397606 HPCAL1P37235 193 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 ETV3P41162 512 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 DMTNQ08495 405 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 TDGQ13569 410 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 FRG1Q14331 258 aaKnown RBP8.18□□□□□ -1.1
PTPRD-204ENST00000397606 LILRA6Q6PI73 481 aa8.18□□□□□ -1.1
PTPRD-204ENST00000397606 UBE2ZQ9H832 354 aaPredicted RBP8.18□□□□□ -1.1
PTPRD-204ENST00000397606 SPATA6Q9NWH7 488 aaPredicted RBP8.18□□□□□ -1.1
PTPRD-204ENST00000397606 DOCK5Q9H7D0 1870 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 OTOFQ9HC10 1997 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 PIPSLA2A3N6 862 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 ANKRD65E5RJM6 399 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 LAMTOR5O43504 91 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 PI15O43692 258 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 ADRB3P13945 408 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 ARRB1P49407 418 aaPredicted RBP8.17□□□□□ -1.1
PTPRD-204ENST00000397606 GALK1P51570 392 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 AP1S2P56377 157 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 LCP2Q13094 533 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 ZNF460Q14592 562 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 CD300LGQ6UXG3 332 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 ZDHHC14Q8IZN3 488 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 GLYATL1Q969I3 302 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 ELSPBP1Q96BH3 223 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 MTFMTQ96DP5 389 aaKnown RBP8.17□□□□□ -1.1
PTPRD-204ENST00000397606 KLHDC7BQ96G42 594 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 SLC25A23Q9BV35 468 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 GSDMCQ9BYG8 508 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 ATG10Q9H0Y0 220 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 VCX3AQ9NNX9 186 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 ITM2CQ9NQX7 267 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 RIMKLBQ9ULI2 386 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 CYP8B1Q9UNU6 501 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 TRBV23OR9-2A0A075B6M9 112 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 A0A1W2PQU0 124 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 RHPN2P1A8MT19 583 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 RNGTTO60942 597 aaKnown RBP8.17□□□□□ -1.1
PTPRD-204ENST00000397606 IGLV3-25P01717 112 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 TARSP26639 723 aaKnown RBP8.17□□□□□ -1.1
PTPRD-204ENST00000397606 SERPINB3P29508 390 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 RPL3P39023 403 aaKnown RBP8.17□□□□□ -1.1
PTPRD-204ENST00000397606 PKNOX1P55347 436 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 CDC16Q13042 620 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 TAF11Q15544 211 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 GRAMD1BQ3KR37 738 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 FUT11Q495W5 492 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 KIAA1161Q6NSJ0 714 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 ADGRD2Q7Z7M1 963 aa8.17□□□□□ -1.1
PTPRD-204ENST00000397606 LONP2Q86WA8 852 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms