RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 FUCA1P04066 466 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 OR56A5P0C7T3 313 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 PI4KAP42356 2102 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 CTSKP43235 329 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 MSH2P43246 934 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 ADARP55265 1226 aaKnown RBP23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 BNC1Q01954 994 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 PPARDQ03181 441 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 ZNF542PQ5EBM4 170 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 GRTP1Q5TC63 336 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 LRRTM4Q86VH4 590 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 GALNT13Q8IUC8 556 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 SLC44A1Q8WWI5 657 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 SCARF2Q96GP6 870 aaPredicted RBP23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 ATXN7L3BQ96GX2 97 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 ZNF514Q96K75 400 aaPredicted RBP23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 PAFAH2Q99487 392 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 CAPN10Q9HC96 672 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 DNAJC28Q9NX36 388 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 GMEB2Q9UKD1 530 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 PNMA8BQ9ULN7 279 aaPredicted RBP23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 SLC6A14Q9UN76 642 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 GPSM3Q9Y4H4 160 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 PCYT1BQ9Y5K3 369 aaPredicted RBP23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 SNX11Q9Y5W9 270 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 IKBKGQ9Y6K9 419 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 F8W8V4 182 aa23.26■■□□□ 1.31
TSPAN4-203ENST00000397397 SCAMP1O15126 338 aa23.26■■□□□ 1.31
TSPAN4-203ENST00000397397 RASGRP1O95267 797 aa23.26■■□□□ 1.31
TSPAN4-203ENST00000397397 TNFP01375 233 aa23.26■■□□□ 1.31
TSPAN4-203ENST00000397397 ESR1P03372 595 aa23.26■■□□□ 1.31
TSPAN4-203ENST00000397397 RETP07949 1114 aa23.26■■□□□ 1.31
TSPAN4-203ENST00000397397 INHBAP08476 426 aa23.26■■□□□ 1.31
TSPAN4-203ENST00000397397 PKMP14618 531 aaKnown RBP23.26■■□□□ 1.31
TSPAN4-203ENST00000397397 BCL7AQ4VC05 210 aa23.26■■□□□ 1.31
TSPAN4-203ENST00000397397 CTSL3PQ5NE16 218 aa23.26■■□□□ 1.31
TSPAN4-203ENST00000397397 ZNF549Q6P9A3 640 aa23.26■■□□□ 1.31
TSPAN4-203ENST00000397397 FBXO38Q6PIJ6 1188 aa23.26■■□□□ 1.31
TSPAN4-203ENST00000397397 SLC23A3Q6PIS1 610 aa23.26■■□□□ 1.31
TSPAN4-203ENST00000397397 ZC3HC1Q86WB0 502 aaKnown RBP23.26■■□□□ 1.31
TSPAN4-203ENST00000397397 BEND7Q8N7W2 519 aaPredicted RBP23.26■■□□□ 1.31
TSPAN4-203ENST00000397397 BIRC8Q96P09 236 aa23.26■■□□□ 1.31
TSPAN4-203ENST00000397397 RBBP8Q99708 897 aa23.26■■□□□ 1.31
TSPAN4-203ENST00000397397 RHOJQ9H4E5 214 aa23.26■■□□□ 1.31
TSPAN4-203ENST00000397397 FSCN3Q9NQT6 498 aa23.26■■□□□ 1.31
TSPAN4-203ENST00000397397 GPR34Q9UPC5 381 aa23.26■■□□□ 1.31
TSPAN4-203ENST00000397397 PIKFYVEQ9Y2I7 2098 aa23.26■■□□□ 1.31
TSPAN4-203ENST00000397397 QSOX1O00391 747 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 KMOO15229 486 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 NUDT17P0C025 328 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 SPRP35270 261 aaPredicted RBP23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 PYCR3Q53H96 274 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 ZNF547Q8IVP9 402 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 PHACTR4Q8IZ21 702 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 OR2M4Q96R27 311 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 NDNQ99608 321 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 AARSD1Q9BTE6 412 aaKnown RBP23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 SMOC1Q9H4F8 434 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 CORO1CQ9ULV4 474 aaPredicted RBP23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 PLAAQ9Y263 795 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 DGKBQ9Y6T7 804 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 H3BMM5 538 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 ITGB6P18564 788 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 PBLDP30039 288 aaPredicted RBP23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 PRLHRP49683 370 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 BLKP51451 505 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 HK3P52790 923 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 IFFO1Q0D2I5 559 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 GRIK2Q13002 908 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 PLA2G4EQ3MJ16 856 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 PLA2G2CQ5R387 149 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 PRAMEF14Q5SWL7 426 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 GPATCH11Q8N954 259 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 OR2W6PQ8NHA6 318 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 VPS39Q96JC1 886 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 MCMBPQ9BTE3 642 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 NUSAP1Q9BXS6 441 aaKnown RBP23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 TCEAL2Q9H3H9 227 aaPredicted RBP23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 ERVMER34-1Q9H9K5 563 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 KLF15Q9UIH9 416 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 COMMD10Q9Y6G5 202 aa23.25■■□□□ 1.31
TSPAN4-203ENST00000397397 TMEM131Q92545 1883 aa23.24■■□□□ 1.31
TSPAN4-203ENST00000397397 ZFHX2Q9C0A1 2572 aaPredicted RBP23.24■■□□□ 1.31
TSPAN4-203ENST00000397397 ADAMTS9Q9P2N4 1935 aa23.24■■□□□ 1.31
TSPAN4-203ENST00000397397 IQCF5A8MTL0 148 aa23.24■■□□□ 1.31
TSPAN4-203ENST00000397397 KHNYNO15037 678 aaKnown RBP23.24■■□□□ 1.31
TSPAN4-203ENST00000397397 POP7O75817 140 aaKnown RBP23.24■■□□□ 1.31
TSPAN4-203ENST00000397397 TRIM16O95361 564 aa23.24■■□□□ 1.31
TSPAN4-203ENST00000397397 FTH1P02794 183 aa23.24■■□□□ 1.31
TSPAN4-203ENST00000397397 CSF2P04141 144 aa23.24■■□□□ 1.31
TSPAN4-203ENST00000397397 JUNDP17535 347 aa23.24■■□□□ 1.31
TSPAN4-203ENST00000397397 ILF2Q12905 390 aaKnown RBP23.24■■□□□ 1.31
TSPAN4-203ENST00000397397 RBM20Q5T481 1227 aaKnown RBP23.24■■□□□ 1.31
TSPAN4-203ENST00000397397 CHST15Q7LFX5 561 aaPredicted RBP23.24■■□□□ 1.31
TSPAN4-203ENST00000397397 KRT222Q8N1A0 295 aa23.24■■□□□ 1.31
TSPAN4-203ENST00000397397 DCAKDQ8WVC6 231 aa23.24■■□□□ 1.31
TSPAN4-203ENST00000397397 ELMO2Q96JJ3 720 aa23.24■■□□□ 1.31
TSPAN4-203ENST00000397397 CCM2Q9BSQ5 444 aa23.24■■□□□ 1.31
TSPAN4-203ENST00000397397 TSSK1BQ9BXA7 367 aa23.24■■□□□ 1.31
TSPAN4-203ENST00000397397 SLC13A1Q9BZW2 595 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms