RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 SLC12A9Q9BXP2 914 aa18.53■□□□□ 0.56
MCF2L-207ENST00000397024 LACRTQ9GZZ8 138 aa18.53■□□□□ 0.56
MCF2L-207ENST00000397024 UCK1Q9HA47 277 aa18.53■□□□□ 0.56
MCF2L-207ENST00000397024 FBXO8Q9NRD0 319 aa18.53■□□□□ 0.56
MCF2L-207ENST00000397024 RSPH14Q9UHP6 348 aa18.53■□□□□ 0.56
MCF2L-207ENST00000397024 PILRAQ9UKJ1 303 aa18.53■□□□□ 0.56
MCF2L-207ENST00000397024 WDR37Q9Y2I8 494 aa18.53■□□□□ 0.56
MCF2L-207ENST00000397024 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.53■□□□□ 0.56
MCF2L-207ENST00000397024 FLNBO75369 2602 aaKnown RBP18.53■□□□□ 0.56
MCF2L-207ENST00000397024 B8ZZF3 427 aa18.52■□□□□ 0.56
MCF2L-207ENST00000397024 C9P02748 559 aa18.52■□□□□ 0.56
MCF2L-207ENST00000397024 LIFP15018 202 aa18.52■□□□□ 0.56
MCF2L-207ENST00000397024 HLA-DPA1P20036 260 aa18.52■□□□□ 0.56
MCF2L-207ENST00000397024 IDSP22304 550 aa18.52■□□□□ 0.56
MCF2L-207ENST00000397024 CTNNA1P35221 906 aaKnown RBP18.52■□□□□ 0.56
MCF2L-207ENST00000397024 SPAM1P38567 509 aa18.52■□□□□ 0.56
MCF2L-207ENST00000397024 CTSCP53634 463 aa18.52■□□□□ 0.56
MCF2L-207ENST00000397024 COPS2P61201 443 aa18.52■□□□□ 0.56
MCF2L-207ENST00000397024 OTUD4Q01804 1114 aaKnown RBP18.52■□□□□ 0.56
MCF2L-207ENST00000397024 WASH2PQ6VEQ5 465 aa18.52■□□□□ 0.56
MCF2L-207ENST00000397024 RAD9BQ6WBX8 426 aa18.52■□□□□ 0.56
MCF2L-207ENST00000397024 TIPARPQ7Z3E1 657 aaKnown RBP18.52■□□□□ 0.56
MCF2L-207ENST00000397024 GLT6D1Q7Z4J2 308 aa18.52■□□□□ 0.56
MCF2L-207ENST00000397024 TRAPPC5Q8IUR0 188 aa18.52■□□□□ 0.56
MCF2L-207ENST00000397024 CACNA2D3Q8IZS8 1091 aa18.52■□□□□ 0.56
MCF2L-207ENST00000397024 DTX3LQ8TDB6 740 aa18.52■□□□□ 0.56
MCF2L-207ENST00000397024 GBA3Q9H227 469 aa18.52■□□□□ 0.56
MCF2L-207ENST00000397024 EPB41L1Q9H4G0 881 aa18.52■□□□□ 0.56
MCF2L-207ENST00000397024 WASH6PQ9NQA3 447 aa18.52■□□□□ 0.56
MCF2L-207ENST00000397024 HACD3Q9P035 362 aa18.52■□□□□ 0.56
MCF2L-207ENST00000397024 KCTD3Q9Y597 815 aa18.52■□□□□ 0.56
MCF2L-207ENST00000397024 MN1Q10571 1320 aaPredicted RBP18.51■□□□□ 0.55
MCF2L-207ENST00000397024 SPTA1P02549 2419 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 RAD1O60671 282 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 POP7O75817 140 aaKnown RBP18.51■□□□□ 0.55
MCF2L-207ENST00000397024 UBXN7O94888 489 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 ITGB2P05107 769 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 ADRA1AP35348 466 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 ATP1A2P50993 1020 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 RAB15P59190 212 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 GPRC6AQ5T6X5 926 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 AGAP9Q5VTM2 703 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 TMEM220Q6QAJ8 160 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 RANBP10Q6VN20 620 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 FAM83HQ6ZRV2 1179 aaPredicted RBP18.51■□□□□ 0.55
MCF2L-207ENST00000397024 PLXDC1Q8IUK5 500 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 TMTC1Q8IUR5 882 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 TRIM48Q8IWZ4 208 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 IL22RA1Q8N6P7 574 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 ZSCAN1Q8NBB4 408 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 AVL9Q8NBF6 648 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 NAT14Q8WUY8 206 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 ALG3Q92685 438 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 RNF31Q96EP0 1072 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 MRFAP1L1Q96HT8 127 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 C9orf72Q96LT7 481 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 APOL2Q9BQE5 337 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 FICDQ9BVA6 458 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 OSBPL8Q9BZF1 889 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 SLC40A1Q9NP59 571 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 LUC7LQ9NQ29 371 aaKnown RBP18.51■□□□□ 0.55
MCF2L-207ENST00000397024 SIDT1Q9NXL6 827 aaKnown RBP18.51■□□□□ 0.55
MCF2L-207ENST00000397024 ARL5AQ9Y689 179 aa18.51■□□□□ 0.55
MCF2L-207ENST00000397024 GLYATL1P3A0A0U1RQE8 302 aa18.5■□□□□ 0.55
MCF2L-207ENST00000397024 PJA2O43164 708 aa18.5■□□□□ 0.55
MCF2L-207ENST00000397024 KIF1CO43896 1103 aaKnown RBP18.5■□□□□ 0.55
MCF2L-207ENST00000397024 FAM87AP0C7U9 286 aa18.5■□□□□ 0.55
MCF2L-207ENST00000397024 PYGMP11217 842 aa18.5■□□□□ 0.55
MCF2L-207ENST00000397024 LEPRP48357 1165 aaKnown RBP18.5■□□□□ 0.55
MCF2L-207ENST00000397024 MSLNQ13421 630 aaPredicted RBP18.5■□□□□ 0.55
MCF2L-207ENST00000397024 GPR18Q14330 331 aa18.5■□□□□ 0.55
MCF2L-207ENST00000397024 ANKRD20A2Q5SQ80 823 aa18.5■□□□□ 0.55
MCF2L-207ENST00000397024 CCDC181Q5TID7 509 aa18.5■□□□□ 0.55
MCF2L-207ENST00000397024 ANKRD20A1Q5TYW2 823 aa18.5■□□□□ 0.55
MCF2L-207ENST00000397024 ANKRD20A3Q5VUR7 823 aa18.5■□□□□ 0.55
MCF2L-207ENST00000397024 ACRBPQ8NEB7 543 aa18.5■□□□□ 0.55
MCF2L-207ENST00000397024 DDHD1Q8NEL9 900 aa18.5■□□□□ 0.55
MCF2L-207ENST00000397024 BRSK1Q8TDC3 778 aa18.5■□□□□ 0.55
MCF2L-207ENST00000397024 RSC1A1Q92681 617 aa18.5■□□□□ 0.55
MCF2L-207ENST00000397024 TTC25Q96NG3 672 aa18.5■□□□□ 0.55
MCF2L-207ENST00000397024 TGM7Q96PF1 710 aa18.5■□□□□ 0.55
MCF2L-207ENST00000397024 TEFMQ96QE5 360 aaKnown RBP18.5■□□□□ 0.55
MCF2L-207ENST00000397024 EFR3BQ9Y2G0 817 aa18.5■□□□□ 0.55
MCF2L-207ENST00000397024 STX7O15400 261 aaKnown RBP18.49■□□□□ 0.55
MCF2L-207ENST00000397024 ANKRD34CP0C6C1 535 aa18.49■□□□□ 0.55
MCF2L-207ENST00000397024 RBP3P10745 1247 aa18.49■□□□□ 0.55
MCF2L-207ENST00000397024 AMD1P17707 334 aa18.49■□□□□ 0.55
MCF2L-207ENST00000397024 ITGB6P18564 788 aa18.49■□□□□ 0.55
MCF2L-207ENST00000397024 CTNNA2P26232 953 aa18.49■□□□□ 0.55
MCF2L-207ENST00000397024 PSMB4P28070 264 aa18.49■□□□□ 0.55
MCF2L-207ENST00000397024 PTPN7P35236 360 aa18.49■□□□□ 0.55
MCF2L-207ENST00000397024 TNNT3P45378 269 aaPredicted RBP18.49■□□□□ 0.55
MCF2L-207ENST00000397024 GEMP55040 296 aa18.49■□□□□ 0.55
MCF2L-207ENST00000397024 EIF3EP60228 445 aaKnown RBP18.49■□□□□ 0.55
MCF2L-207ENST00000397024 GTF2H3Q13889 308 aa18.49■□□□□ 0.55
MCF2L-207ENST00000397024 LDLRAP1Q5SW96 308 aa18.49■□□□□ 0.55
MCF2L-207ENST00000397024 ZDHHC20Q5W0Z9 365 aa18.49■□□□□ 0.55
MCF2L-207ENST00000397024 CEACAM20Q6UY09 585 aa18.49■□□□□ 0.55
MCF2L-207ENST00000397024 AMZ2Q86W34 360 aa18.49■□□□□ 0.55
MCF2L-207ENST00000397024 UNC5BQ8IZJ1 945 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms