RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 ERVPABLB-1P60509 514 aa13.79□□□□□ -0.2
NUP98-204ENST00000397004 RPS6KA2Q15349 733 aa13.79□□□□□ -0.2
NUP98-204ENST00000397004 CCL14Q16627 93 aa13.79□□□□□ -0.2
NUP98-204ENST00000397004 LETMD1Q6P1Q0 360 aa13.79□□□□□ -0.2
NUP98-204ENST00000397004 ABI1Q8IZP0 508 aa13.79□□□□□ -0.2
NUP98-204ENST00000397004 TTC9BQ8N6N2 239 aa13.79□□□□□ -0.2
NUP98-204ENST00000397004 ZNF583Q96ND8 569 aa13.79□□□□□ -0.2
NUP98-204ENST00000397004 SLC6A13Q9NSD5 602 aa13.79□□□□□ -0.2
NUP98-204ENST00000397004 TRNAU1APQ9NX07 287 aaKnown RBP13.79□□□□□ -0.2
NUP98-204ENST00000397004 CBFA2T3O75081 653 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 OR4F21O95013 312 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 PRKACGP22612 351 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 RGRP47804 291 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 TMBIM6P55061 237 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 ITGADQ13349 1161 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 BFSP2Q13515 415 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 NR1D2Q14995 579 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 CTF1Q16619 201 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 CHPFQ8IZ52 775 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 FBXO39Q8N4B4 442 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 CHDHQ8NE62 594 aaPredicted RBP13.78□□□□□ -0.2
NUP98-204ENST00000397004 FUNDC2Q9BWH2 189 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 BCAS1O75363 584 aaPredicted RBP13.78□□□□□ -0.2
NUP98-204ENST00000397004 INMTO95050 263 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 CTSHP09668 335 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 ZNF865P0CJ78 1059 aaPredicted RBP13.78□□□□□ -0.2
NUP98-204ENST00000397004 PCSK1P29120 753 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 MRPL19P49406 292 aaKnown RBP13.78□□□□□ -0.2
NUP98-204ENST00000397004 GP2P55259 537 aaKnown RBP13.78□□□□□ -0.2
NUP98-204ENST00000397004 KIAA0040Q15053 153 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 TYSND1Q2T9J0 566 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 FBXL22Q6P050 247 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 BEND5Q7L4P6 421 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 ABHD11Q8NFV4 315 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 TUBA1CQ9BQE3 449 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 VAPAQ9P0L0 249 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 PCDHB3Q9Y5E6 796 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 H0YAE9 185 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 G6PDP11413 515 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 PCMT1P22061 227 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 EEF1B2P24534 225 aaKnown RBP13.78□□□□□ -0.2
NUP98-204ENST00000397004 CD6P30203 668 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 ALDH3A2P51648 485 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 EEFSECP57772 596 aaKnown RBP13.78□□□□□ -0.2
NUP98-204ENST00000397004 KCNK10P57789 538 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 EGFLAMQ63HQ2 1017 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 MSANTD2Q6P1R3 559 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 MDGA1Q8NFP4 955 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 BRI3BPQ8WY22 251 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 CDKN2AIPNLQ96HQ2 116 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 CNDP2Q96KP4 475 aaKnown RBP13.78□□□□□ -0.2
NUP98-204ENST00000397004 TRIB3Q96RU7 358 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 GPR21Q99679 349 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 EIF2B4Q9UI10 523 aaKnown RBP13.78□□□□□ -0.2
NUP98-204ENST00000397004 PMF1-BGLAPU3KQ54 211 aa13.78□□□□□ -0.2
NUP98-204ENST00000397004 TRPM7Q96QT4 1865 aa13.77□□□□□ -0.2
NUP98-204ENST00000397004 KLK8O60259 260 aa13.77□□□□□ -0.2
NUP98-204ENST00000397004 GGT5P36269 586 aa13.77□□□□□ -0.2
NUP98-204ENST00000397004 DDR2Q16832 855 aa13.77□□□□□ -0.2
NUP98-204ENST00000397004 ZFAND4Q86XD8 727 aa13.77□□□□□ -0.2
NUP98-204ENST00000397004 MSRB3Q8IXL7 192 aa13.77□□□□□ -0.2
NUP98-204ENST00000397004 CDYL2Q8N8U2 506 aa13.77□□□□□ -0.2
NUP98-204ENST00000397004 DDHD1Q8NEL9 900 aa13.77□□□□□ -0.2
NUP98-204ENST00000397004 OR4L1Q8NH43 312 aa13.77□□□□□ -0.2
NUP98-204ENST00000397004 FRS2Q8WU20 508 aa13.77□□□□□ -0.2
NUP98-204ENST00000397004 RHNO1Q9BSD3 238 aa13.77□□□□□ -0.2
NUP98-204ENST00000397004 GPN2Q9H9Y4 310 aaPredicted RBP13.77□□□□□ -0.2
NUP98-204ENST00000397004 FAM118AQ9NWS6 357 aa13.77□□□□□ -0.2
NUP98-204ENST00000397004 RNF112Q9ULX5 631 aa13.77□□□□□ -0.2
NUP98-204ENST00000397004 PLXNA4Q9HCM2 1894 aa13.77□□□□□ -0.2
NUP98-204ENST00000397004 TOR1BO14657 336 aa13.77□□□□□ -0.21
NUP98-204ENST00000397004 DFNA5O60443 496 aa13.77□□□□□ -0.21
NUP98-204ENST00000397004 CLPXO76031 633 aa13.77□□□□□ -0.21
NUP98-204ENST00000397004 ESRRBO95718 433 aa13.77□□□□□ -0.21
NUP98-204ENST00000397004 ENO2P09104 434 aaPredicted RBP13.77□□□□□ -0.21
NUP98-204ENST00000397004 ZNF12P17014 697 aa13.77□□□□□ -0.21
NUP98-204ENST00000397004 BTG3Q14201 252 aaPredicted RBP13.77□□□□□ -0.21
NUP98-204ENST00000397004 RFTN2Q52LD8 501 aaPredicted RBP13.77□□□□□ -0.21
NUP98-204ENST00000397004 STK32CQ86UX6 486 aa13.77□□□□□ -0.21
NUP98-204ENST00000397004 TRUB1Q8WWH5 349 aaKnown RBP13.77□□□□□ -0.21
NUP98-204ENST00000397004 BTBD2Q9BX70 525 aa13.77□□□□□ -0.21
NUP98-204ENST00000397004 TDRD1Q9BXT4 1180 aaKnown RBP13.77□□□□□ -0.21
NUP98-204ENST00000397004 LRRC3Q9BY71 257 aa13.77□□□□□ -0.21
NUP98-204ENST00000397004 TMEM248Q9NWD8 314 aa13.77□□□□□ -0.21
NUP98-204ENST00000397004 PSME2Q9UL46 239 aa13.77□□□□□ -0.21
NUP98-204ENST00000397004 GREB1Q4ZG55 1949 aa13.77□□□□□ -0.21
NUP98-204ENST00000397004 A0A0D9SEW6 157 aa13.77□□□□□ -0.21
NUP98-204ENST00000397004 IQCF5A8MTL0 148 aa13.77□□□□□ -0.21
NUP98-204ENST00000397004 NIPSNAP2O75323 286 aa13.77□□□□□ -0.21
NUP98-204ENST00000397004 CYP11A1P05108 521 aa13.77□□□□□ -0.21
NUP98-204ENST00000397004 MAP4P27816 1152 aaKnown RBP13.77□□□□□ -0.21
NUP98-204ENST00000397004 NRG1Q02297 640 aaPredicted RBP13.77□□□□□ -0.21
NUP98-204ENST00000397004 CD47Q08722 323 aa13.77□□□□□ -0.21
NUP98-204ENST00000397004 SFSWAPQ12872 951 aaKnown RBP13.77□□□□□ -0.21
NUP98-204ENST00000397004 DAG1Q14118 895 aa13.77□□□□□ -0.21
NUP98-204ENST00000397004 C16orf87Q6PH81 154 aa13.77□□□□□ -0.21
NUP98-204ENST00000397004 HID1Q8IV36 788 aa13.77□□□□□ -0.21
NUP98-204ENST00000397004 SIDT2Q8NBJ9 832 aaKnown RBP13.77□□□□□ -0.21
NUP98-204ENST00000397004 OR10Q1Q8NGQ4 319 aa13.77□□□□□ -0.21
NUP98-204ENST00000397004 EEF1AKMT1Q8WVE0 214 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms