RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 SNX7Q9UNH6 387 aa8.27□□□□□ -1.09
SCFD1-202ENST00000396629 RPL26L1Q9UNX3 145 aaKnown RBP8.27□□□□□ -1.09
SCFD1-202ENST00000396629 CHKBQ9Y259 395 aa8.27□□□□□ -1.09
SCFD1-202ENST00000396629 NTNG1Q9Y2I2 539 aa8.27□□□□□ -1.09
SCFD1-202ENST00000396629 COPG1Q9Y678 874 aaKnown RBP8.27□□□□□ -1.09
SCFD1-202ENST00000396629 CCDC88CQ9P219 2028 aa8.27□□□□□ -1.09
SCFD1-202ENST00000396629 MDC1Q14676 2089 aaKnown RBP8.26□□□□□ -1.09
SCFD1-202ENST00000396629 HEATR9A2RTY3 570 aa8.26□□□□□ -1.09
SCFD1-202ENST00000396629 OR52A4PA6NMU1 304 aa8.26□□□□□ -1.09
SCFD1-202ENST00000396629 PDZK1P1A8MUH7 402 aa8.26□□□□□ -1.09
SCFD1-202ENST00000396629 H3BRJ5 948 aa8.26□□□□□ -1.09
SCFD1-202ENST00000396629 PRPSAP2O60256 369 aa8.26□□□□□ -1.09
SCFD1-202ENST00000396629 MTA2O94776 668 aa8.26□□□□□ -1.09
SCFD1-202ENST00000396629 KLK3P07288 261 aaPredicted RBP8.26□□□□□ -1.09
SCFD1-202ENST00000396629 CES1P23141 567 aa8.26□□□□□ -1.09
SCFD1-202ENST00000396629 TUBB4BP68371 445 aa8.26□□□□□ -1.09
SCFD1-202ENST00000396629 TUBB2AQ13885 445 aa8.26□□□□□ -1.09
SCFD1-202ENST00000396629 SYCP1Q15431 976 aa8.26□□□□□ -1.09
SCFD1-202ENST00000396629 INSCQ1MX18 579 aa8.26□□□□□ -1.09
SCFD1-202ENST00000396629 TDRD12Q587J7 1177 aaKnown RBP8.26□□□□□ -1.09
SCFD1-202ENST00000396629 TCP11X2Q5H9J9 407 aa8.26□□□□□ -1.09
SCFD1-202ENST00000396629 PLEKHA7Q6IQ23 1121 aa8.26□□□□□ -1.09
SCFD1-202ENST00000396629 TMCO3Q6UWJ1 677 aa8.26□□□□□ -1.09
SCFD1-202ENST00000396629 LRRTM4Q86VH4 590 aa8.26□□□□□ -1.09
SCFD1-202ENST00000396629 ZC3H18Q86VM9 953 aaKnown RBP8.26□□□□□ -1.09
SCFD1-202ENST00000396629 TMEM126BQ8IUX1 230 aa8.26□□□□□ -1.09
SCFD1-202ENST00000396629 ZNF501Q96CX3 271 aaPredicted RBP8.26□□□□□ -1.09
SCFD1-202ENST00000396629 CXorf40BQ96DE9 158 aa8.26□□□□□ -1.09
SCFD1-202ENST00000396629 CD180Q99467 661 aa8.26□□□□□ -1.09
SCFD1-202ENST00000396629 MAP3K3Q99759 626 aa8.26□□□□□ -1.09
SCFD1-202ENST00000396629 TUBB2BQ9BVA1 445 aa8.26□□□□□ -1.09
SCFD1-202ENST00000396629 TDRD1Q9BXT4 1180 aaKnown RBP8.26□□□□□ -1.09
SCFD1-202ENST00000396629 POLR1EQ9GZS1 481 aaKnown RBP8.26□□□□□ -1.09
SCFD1-202ENST00000396629 RUBCNLQ9H714 662 aa8.26□□□□□ -1.09
SCFD1-202ENST00000396629 ARFGAP3Q9NP61 516 aa8.26□□□□□ -1.09
SCFD1-202ENST00000396629 SAMSN1Q9NSI8 373 aaKnown RBP8.26□□□□□ -1.09
SCFD1-202ENST00000396629 NUP210LQ5VU65 1888 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 C1orf232A0A0U1RR37 186 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 TMEM191CA6NGB0 347 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 MEN1O00255 615 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 LRRTM2O43300 516 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 RNF8O76064 485 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 SLC25A14O95258 325 aaPredicted RBP8.25□□□□□ -1.09
SCFD1-202ENST00000396629 SPTBP11277 2137 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 ATP1A3P13637 1013 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 FECHP22830 423 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 IL4RP24394 825 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 EEF1GP26641 437 aaKnown RBP8.25□□□□□ -1.09
SCFD1-202ENST00000396629 HSD11B2P80365 405 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 DSC2Q02487 901 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 ITKQ08881 620 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 ATP1A4Q13733 1029 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 SEPT7Q16181 437 aaKnown RBP8.25□□□□□ -1.09
SCFD1-202ENST00000396629 DPYSL2Q16555 572 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 CAMK4Q16566 473 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 PLA2G4EQ3MJ16 856 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 ANKRD20A8PQ5CZ79 823 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 ZNF569Q5MCW4 686 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 CRTC3Q6UUV7 619 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 POLNQ7Z5Q5 900 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 LRRC49Q8IUZ0 686 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 ZNF547Q8IVP9 402 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 UBE2Q2Q8WVN8 375 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 MAML1Q92585 1016 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 SGSM3Q96HU1 749 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 MLPHQ9BV36 600 aaPredicted RBP8.25□□□□□ -1.09
SCFD1-202ENST00000396629 SEPT11Q9NVA2 429 aaKnown RBP8.25□□□□□ -1.09
SCFD1-202ENST00000396629 PARVAQ9NVD7 372 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 TAB2Q9NYJ8 693 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 DTLQ9NZJ0 730 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 DNAJC16Q9Y2G8 782 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 PCDHGA10Q9Y5H3 936 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 FER1L5A0AVI2 2057 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 ZGRF1Q86YA3 2104 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 PCM1Q15154 2024 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 TLCD2A6NGC4 264 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 IDSP22304 550 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 RPL10P27635 214 aaKnown RBP8.25□□□□□ -1.09
SCFD1-202ENST00000396629 HNRNPH3P31942 346 aaKnown RBP8.25□□□□□ -1.09
SCFD1-202ENST00000396629 RORAP35398 523 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 ARL4AP40617 200 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 ARL4DP49703 201 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 GPR19Q15760 415 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 QPCTQ16769 361 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 FAM69BQ5VUD6 431 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 LYPLAL1Q5VWZ2 237 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 KLHL35Q6PF15 583 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 FAM198BQ6UWH4 519 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 Q6ZS92 163 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 KCNMB4Q86W47 210 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 LPCAT1Q8NF37 534 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 ARRDC2Q8TBH0 407 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 CCHCR1Q8TD31 782 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 EID2BQ96D98 161 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 CSPG4P5Q96PW8 444 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 SPATA16Q9BXB7 569 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 ILKAPQ9H0C8 392 aaPredicted RBP8.25□□□□□ -1.09
SCFD1-202ENST00000396629 PCDH9Q9HC56 1237 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 NFKBIL1Q9UBC1 381 aaPredicted RBP8.25□□□□□ -1.09
SCFD1-202ENST00000396629 WDR37Q9Y2I8 494 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms