RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 PNPT1Q8TCS8 783 aaKnown RBP9.74□□□□□ -0.85
TRIM39-203ENST00000396547 MCOLN3Q8TDD5 553 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 MAGED4Q96JG8 741 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 MRGPRX2Q96LB1 330 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 MYOCQ99972 504 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 TDRD1Q9BXT4 1180 aaKnown RBP9.74□□□□□ -0.85
TRIM39-203ENST00000396547 WDR12Q9GZL7 423 aaKnown RBP9.74□□□□□ -0.85
TRIM39-203ENST00000396547 C6orf62Q9GZU0 229 aaPredicted RBP9.74□□□□□ -0.85
TRIM39-203ENST00000396547 MRGBPQ9NV56 204 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 TMEM30AQ9NV96 361 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 GALPQ9UBC7 116 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 SLCO3A1Q9UIG8 710 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 RNF112Q9ULX5 631 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 TRIM64A6NGJ6 449 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 ASB14A6NK59 587 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 PSMD3O43242 534 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 GJB3O75712 270 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 ALPLP05186 524 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 CLCN5P51795 746 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 TRIP4Q15650 581 aaPredicted RBP9.74□□□□□ -0.85
TRIM39-203ENST00000396547 TTC23Q5W5X9 447 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 SULT1C3Q6IMI6 304 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 KIAA0408Q6ZU52 694 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 BNIPLQ7Z465 357 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 MILR1Q7Z6M3 343 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 TAC4Q86UU9 113 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 ZFP42Q96MM3 310 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 RIBC2Q9H4K1 309 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 SDR39U1Q9NRG7 319 aaPredicted RBP9.74□□□□□ -0.85
TRIM39-203ENST00000396547 RASSF1Q9NS23 344 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 PAK1IP1Q9NWT1 392 aaPredicted RBP9.74□□□□□ -0.85
TRIM39-203ENST00000396547 GMIPQ9P107 970 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.74□□□□□ -0.85
TRIM39-203ENST00000396547 ITGB1BP2Q9UKP3 347 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 LCTP09848 1927 aa9.74□□□□□ -0.85
TRIM39-203ENST00000396547 ZNF99A8MXY4 864 aaPredicted RBP9.73□□□□□ -0.85
TRIM39-203ENST00000396547 MFN2O95140 757 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 GOT2P00505 430 aaKnown RBP9.73□□□□□ -0.85
TRIM39-203ENST00000396547 HOXD10P28358 340 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 IL12AP29459 219 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 HOXA11P31270 313 aaPredicted RBP9.73□□□□□ -0.85
TRIM39-203ENST00000396547 LEPRP48357 1165 aaKnown RBP9.73□□□□□ -0.85
TRIM39-203ENST00000396547 PIK3CGP48736 1102 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 LILRA4P59901 499 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 COPZ1P61923 177 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 DSC2Q02487 901 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 EMX1Q04741 257 aaPredicted RBP9.73□□□□□ -0.85
TRIM39-203ENST00000396547 GTF2H3Q13889 308 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 TTLL4Q14679 1199 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 DGUOKQ16854 277 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 SYT16Q17RD7 645 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 MORN1Q5T089 497 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 ATAD3BQ5T9A4 648 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 KIAA0319Q5VV43 1072 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 UGT3A1Q6NUS8 523 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 PLEKHG7Q6ZR37 379 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 GET4Q7L5D6 327 aaPredicted RBP9.73□□□□□ -0.85
TRIM39-203ENST00000396547 FAM126BQ8IXS8 530 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 MICU2Q8IYU8 434 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 FBXO39Q8N4B4 442 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 LRRC52Q8N7C0 313 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 OR10A6Q8NH74 314 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 FAM162AQ96A26 154 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 FKBP10Q96AY3 582 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 YTHDF1Q9BYJ9 559 aaKnown RBP9.73□□□□□ -0.85
TRIM39-203ENST00000396547 TRIM54Q9BYV2 358 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 CARS2Q9HA77 564 aaKnown RBP9.73□□□□□ -0.85
TRIM39-203ENST00000396547 ENTPD7Q9NQZ7 604 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 DDX28Q9NUL7 540 aaKnown RBP9.73□□□□□ -0.85
TRIM39-203ENST00000396547 ADGRE2Q9UHX3 823 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 LEF1Q9UJU2 399 aaPredicted RBP9.73□□□□□ -0.85
TRIM39-203ENST00000396547 UBQLN1Q9UMX0 589 aaKnown RBP9.73□□□□□ -0.85
TRIM39-203ENST00000396547 B3GNT3Q9Y2A9 372 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 MYO1GB0I1T2 1018 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 H0YAE9 185 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 DBTP11182 482 aaKnown RBP9.73□□□□□ -0.85
TRIM39-203ENST00000396547 S100A1P23297 94 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 EDNRBP24530 442 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 FMO4P31512 558 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 TRPC1P48995 793 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 SERPINH1P50454 418 aaKnown RBP9.73□□□□□ -0.85
TRIM39-203ENST00000396547 SNX17Q15036 470 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 TSNQ15631 228 aaKnown RBP9.73□□□□□ -0.85
TRIM39-203ENST00000396547 CTF1Q16619 201 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 SMN1Q16637 294 aaKnown RBP9.73□□□□□ -0.85
TRIM39-203ENST00000396547 SGO1Q5FBB7 561 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 KIAA0930Q6ICG6 404 aaPredicted RBP9.73□□□□□ -0.85
TRIM39-203ENST00000396547 SLC27A1Q6PCB7 646 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 AKAP14Q86UN6 197 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 CNTN4Q8IWV2 1026 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 SDR16C5Q8N3Y7 309 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 NT5C3BQ969T7 300 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 UBXN10Q96LJ8 280 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 SMOQ99835 787 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 MCOLN1Q9GZU1 580 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 VTA1Q9NP79 307 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 TREX1Q9NSU2 369 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 GDAP2Q9NXN4 497 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 SCHIP1Q9P0W5 487 aaPredicted RBP9.73□□□□□ -0.85
TRIM39-203ENST00000396547 ENPP5Q9UJA9 477 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms