RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 HSPA13P48723 471 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 CLCN2P51788 898 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 ATXN3P54252 364 aaPredicted RBP16.59■□□□□ 0.25
NUP50-202ENST00000396096 ERVK-8P63133 956 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 RPS6KA2Q15349 733 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 VPS26BQ4G0F5 336 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 PDCD4Q53EL6 469 aaKnown RBP16.59■□□□□ 0.25
NUP50-202ENST00000396096 PTRHD1Q6GMV3 140 aaKnown RBP16.59■□□□□ 0.25
NUP50-202ENST00000396096 PDPRQ8NCN5 879 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 OR6K2Q8NGY2 324 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 ATP6V1E2Q96A05 226 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 Q9H521 79 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 IL26Q9NPH9 171 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 RIC8BQ9NVN3 520 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 CLEC4EQ9ULY5 219 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 ATP11BQ9Y2G3 1177 aa16.59■□□□□ 0.25
NUP50-202ENST00000396096 TRAV19A0A0A6YYK7 116 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 H0YJX3 145 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 NME4O00746 187 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 GLUD1P00367 558 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 CNPP09543 421 aaKnown RBP16.58■□□□□ 0.24
NUP50-202ENST00000396096 SPATA31D3P0C874 917 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 CTSAP10619 480 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 PAX7P23759 505 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 ACRV1P26436 265 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 ZFP36L2P47974 494 aaKnown RBP16.58■□□□□ 0.24
NUP50-202ENST00000396096 DIO3P55073 304 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 NME5P56597 212 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 RCAN2Q14206 197 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 PDK3Q15120 406 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 GPR33Q49SQ1 333 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 FBXL19Q6PCT2 694 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 LILRA6Q6PI73 481 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 SPATA31D4Q6ZUB0 917 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 HS6ST3Q8IZP7 471 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 BHMTQ93088 406 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 VOPP1Q96AW1 172 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 SLCO4A1Q96BD0 722 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 TRAPPC9Q96Q05 1148 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 GCNAQ96QF7 691 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 CIPCQ9C0C6 399 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 ASB8Q9H765 288 aa16.58■□□□□ 0.24
NUP50-202ENST00000396096 INTS6Q9UL03 887 aaKnown RBP16.58■□□□□ 0.24
NUP50-202ENST00000396096 A0A1W2PP18 115 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 AGAP14A8MT82 685 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 DNAJA2O60884 412 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 OR4F21O95013 312 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 CLDN7O95471 211 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 BPIP17213 487 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 SERPINA4P29622 427 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 CD70P32970 193 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 CA5AP35218 305 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 RGS4P49798 205 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 ERVPABLB-1P60509 514 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 GRAMD4Q6IC98 578 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 UGT2A3Q6UWM9 527 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 MACC1Q6ZN28 852 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 FRA10AC1Q70Z53 315 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 DHFR2Q86XF0 187 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 SLC15A3Q8IY34 581 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 GOLM1Q8NBJ4 401 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 OR2AP1Q8NGE2 309 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 OR2T11Q8NH01 316 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 PBXIP1Q96AQ6 731 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 ISG20Q96AZ6 181 aaKnown RBP16.57■□□□□ 0.24
NUP50-202ENST00000396096 CCDC97Q96F63 343 aaPredicted RBP16.57■□□□□ 0.24
NUP50-202ENST00000396096 SLC39A3Q9BRY0 314 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 FAM192AQ9GZU8 254 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 ZIM2Q9NZV7 527 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 OARD1Q9Y530 152 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 PTPRSQ13332 1948 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 ANKRD12Q6UB98 2062 aa16.57■□□□□ 0.24
NUP50-202ENST00000396096 GLYATL1P3A0A0U1RQE8 302 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 RAD51BO15315 384 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 EEDO75530 441 aaKnown RBP16.56■□□□□ 0.24
NUP50-202ENST00000396096 STAMBPO95630 424 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 LRG1P02750 347 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 S100BP04271 92 aaPredicted RBP16.56■□□□□ 0.24
NUP50-202ENST00000396096 ZCCHC18P0CG32 403 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 DGKAP23743 735 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 SPAM1P38567 509 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 BNIP2Q12982 314 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 CRY1Q16526 586 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 MAP7D1Q3KQU3 841 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 DGKKQ5KSL6 1271 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 CCDC149Q6ZUS6 474 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 GOLGA7Q7Z5G4 137 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 FIBCD1Q8N539 461 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 ESAMQ96AP7 390 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 LRRC58Q96CX6 371 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 LRCH3Q96II8 777 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 HTATIP2Q9BUP3 242 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 BOCQ9BWV1 1114 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 TRIM54Q9BYV2 358 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 LATS2Q9NRM7 1088 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 PTBP2Q9UKA9 531 aaKnown RBP16.56■□□□□ 0.24
NUP50-202ENST00000396096 PPIL1Q9Y3C6 166 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 PRSS21Q9Y6M0 314 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 LEFTY2O00292 366 aa16.56■□□□□ 0.24
NUP50-202ENST00000396096 FFAR2O15552 330 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms