RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 CORO1BQ9BR76 489 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 PDGFDQ9GZP0 370 aaPredicted RBP8.61□□□□□ -1.03
BDNF-204ENST00000395980 AP3M1Q9Y2T2 418 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 KPNA6O60684 536 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 NDUFS2O75306 463 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 SOAT2O75908 522 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 GOT2P00505 430 aaKnown RBP8.61□□□□□ -1.03
BDNF-204ENST00000395980 FGF1P05230 155 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 SMPD1P17405 629 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 PCMT1P22061 227 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 CES1P23141 567 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 IL12AP29459 219 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 RYKP34925 604 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 STC1P52823 247 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 SYVN1Q86TM6 617 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 PROKR1Q8TCW9 393 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 FBLIM1Q8WUP2 373 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 TBATAQ96M53 351 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 NODALQ96S42 347 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 HEPHQ9BQS7 1158 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 MTRRQ9UBK8 725 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 PCTPQ9UKL6 214 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 OR51F1A6NGY5 319 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 ZNF99A8MXY4 864 aaPredicted RBP8.6□□□□□ -1.03
BDNF-204ENST00000395980 ECI2O75521 394 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 SNAI1O95863 264 aaPredicted RBP8.6□□□□□ -1.03
BDNF-204ENST00000395980 F2P00734 622 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 EPOP01588 193 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 RHOQP17081 205 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 GRK3P35626 688 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 BAG6P46379 1132 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 CRYBB1P53674 252 aaPredicted RBP8.6□□□□□ -1.03
BDNF-204ENST00000395980 RAD23AP54725 363 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 RAD51Q06609 339 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 PWP1Q13610 501 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 C6orf136Q5SQH8 315 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 GIPC2Q8TF65 315 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 CASP10Q92851 521 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 RPL10LQ96L21 214 aaKnown RBP8.6□□□□□ -1.03
BDNF-204ENST00000395980 ANKHQ9HCJ1 492 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 SEMA4BQ9NPR2 832 aaPredicted RBP8.6□□□□□ -1.03
BDNF-204ENST00000395980 CATSPERZQ9NTU4 200 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 C3orf18Q9UK00 162 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 FAM92AA1XBS5 289 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 M0QX08 132 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 SLC1A7O00341 560 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 FUT4P22083 530 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 TGM1P22735 817 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 MLLT6P55198 1093 aaPredicted RBP8.6□□□□□ -1.03
BDNF-204ENST00000395980 ADAM17P78536 824 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 DSC2Q02487 901 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 CD47Q08722 323 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 POLD3Q15054 466 aaPredicted RBP8.6□□□□□ -1.03
BDNF-204ENST00000395980 IQSEC1Q6DN90 963 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 MSANTD2Q6P1R3 559 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 MFSD4AQ8N468 514 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 ARRDC2Q8TBH0 407 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 PHF10Q8WUB8 498 aaKnown RBP8.6□□□□□ -1.03
BDNF-204ENST00000395980 DCPSQ96C86 337 aaKnown RBP8.6□□□□□ -1.03
BDNF-204ENST00000395980 ZNF382Q96SR6 550 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 ACBD6Q9BR61 282 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 TAS2R13Q9NYV9 303 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.6□□□□□ -1.03
BDNF-204ENST00000395980 SLAMF8Q9P0V8 285 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 USP22Q9UPT9 525 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 TIMM22Q9Y584 194 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 HS3ST4Q9Y661 456 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 A0A1B0GTL3 188 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 SLC16A6O15403 523 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 RPL9P32969 192 aaKnown RBP8.6□□□□□ -1.03
BDNF-204ENST00000395980 GP2P55259 537 aaKnown RBP8.6□□□□□ -1.03
BDNF-204ENST00000395980 DGUOKQ16854 277 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 DPY19L1Q2PZI1 675 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 ZNF691Q5VV52 312 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 GPRIN3Q6ZVF9 776 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 NECAB2Q7Z6G3 386 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 NKAPQ8N5F7 415 aaKnown RBP8.6□□□□□ -1.03
BDNF-204ENST00000395980 AMBRA1Q9C0C7 1298 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 AGO3Q9H9G7 860 aaKnown RBP8.6□□□□□ -1.03
BDNF-204ENST00000395980 SP110Q9HB58 689 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 PRDM5Q9NQX1 630 aaPredicted RBP8.6□□□□□ -1.03
BDNF-204ENST00000395980 UXTQ9UBK9 157 aaPredicted RBP8.6□□□□□ -1.03
BDNF-204ENST00000395980 V9GYQ6 96 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 GBF1Q92538 1859 aa8.6□□□□□ -1.03
BDNF-204ENST00000395980 KDM1AO60341 852 aa8.59□□□□□ -1.03
BDNF-204ENST00000395980 MRPS14O60783 128 aaKnown RBP8.59□□□□□ -1.03
BDNF-204ENST00000395980 NDST3O95803 873 aa8.59□□□□□ -1.03
BDNF-204ENST00000395980 CD9P21926 228 aa8.59□□□□□ -1.03
BDNF-204ENST00000395980 ACVR2AP27037 513 aa8.59□□□□□ -1.03
BDNF-204ENST00000395980 CASP2P42575 452 aa8.59□□□□□ -1.03
BDNF-204ENST00000395980 ISL1P61371 349 aa8.59□□□□□ -1.03
BDNF-204ENST00000395980 YWHAHQ04917 246 aaPredicted RBP8.59□□□□□ -1.03
BDNF-204ENST00000395980 ITKQ08881 620 aa8.59□□□□□ -1.03
BDNF-204ENST00000395980 KCNAB2Q13303 367 aa8.59□□□□□ -1.03
BDNF-204ENST00000395980 CTU2Q2VPK5 515 aaKnown RBP8.59□□□□□ -1.03
BDNF-204ENST00000395980 ATP6AP1LQ52LC2 224 aa8.59□□□□□ -1.03
BDNF-204ENST00000395980 TWF2Q6IBS0 349 aaKnown RBP8.59□□□□□ -1.03
BDNF-204ENST00000395980 SLC2A7Q6PXP3 512 aa8.59□□□□□ -1.03
BDNF-204ENST00000395980 SLCO6A1Q86UG4 719 aa8.59□□□□□ -1.03
BDNF-204ENST00000395980 ZBTB46Q86UZ6 589 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms