RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 SPDL1Q96EA4 605 aa18.39■□□□□ 0.53
SIL1-202ENST00000394817 CCDC97Q96F63 343 aaPredicted RBP18.39■□□□□ 0.53
SIL1-202ENST00000394817 DCUN1D1Q96GG9 259 aa18.39■□□□□ 0.53
SIL1-202ENST00000394817 COPS7BQ9H9Q2 264 aaPredicted RBP18.39■□□□□ 0.53
SIL1-202ENST00000394817 PFDN4Q9NQP4 134 aa18.39■□□□□ 0.53
SIL1-202ENST00000394817 SPATS2LQ9NUQ6 558 aaKnown RBP18.39■□□□□ 0.53
SIL1-202ENST00000394817 GPR45Q9Y5Y3 372 aa18.39■□□□□ 0.53
SIL1-202ENST00000394817 GIPC1O14908 333 aa18.38■□□□□ 0.53
SIL1-202ENST00000394817 RNASEH1O60930 286 aaKnown RBP18.38■□□□□ 0.53
SIL1-202ENST00000394817 BMP1P13497 986 aa18.38■□□□□ 0.53
SIL1-202ENST00000394817 SYN1P17600 705 aa18.38■□□□□ 0.53
SIL1-202ENST00000394817 CD70P32970 193 aa18.38■□□□□ 0.53
SIL1-202ENST00000394817 SLC7A2P52569 658 aa18.38■□□□□ 0.53
SIL1-202ENST00000394817 GRIK2Q13002 908 aa18.38■□□□□ 0.53
SIL1-202ENST00000394817 MED21Q13503 144 aa18.38■□□□□ 0.53
SIL1-202ENST00000394817 C6orf10Q5SRN2 563 aa18.38■□□□□ 0.53
SIL1-202ENST00000394817 PTRHD1Q6GMV3 140 aaKnown RBP18.38■□□□□ 0.53
SIL1-202ENST00000394817 PRMT9Q6P2P2 845 aa18.38■□□□□ 0.53
SIL1-202ENST00000394817 LAYNQ6UX15 382 aa18.38■□□□□ 0.53
SIL1-202ENST00000394817 TSPEARQ8WU66 669 aa18.38■□□□□ 0.53
SIL1-202ENST00000394817 CCT7Q99832 543 aa18.38■□□□□ 0.53
SIL1-202ENST00000394817 MCOLN1Q9GZU1 580 aa18.38■□□□□ 0.53
SIL1-202ENST00000394817 PCDHAC1Q9H158 963 aa18.38■□□□□ 0.53
SIL1-202ENST00000394817 ASB8Q9H765 288 aa18.38■□□□□ 0.53
SIL1-202ENST00000394817 IL26Q9NPH9 171 aa18.38■□□□□ 0.53
SIL1-202ENST00000394817 AIG1Q9NVV5 245 aa18.38■□□□□ 0.53
SIL1-202ENST00000394817 MAP10Q9P2G4 905 aa18.38■□□□□ 0.53
SIL1-202ENST00000394817 ABCD2Q9UBJ2 740 aa18.38■□□□□ 0.53
SIL1-202ENST00000394817 INTS6Q9UL03 887 aaKnown RBP18.38■□□□□ 0.53
SIL1-202ENST00000394817 MYOFQ9NZM1 2061 aa18.38■□□□□ 0.53
SIL1-202ENST00000394817 DOCK6Q96HP0 2047 aa18.38■□□□□ 0.53
SIL1-202ENST00000394817 ANGPT2O15123 496 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 CYBBP04839 570 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 PIM1P11309 404 aaPredicted RBP18.37■□□□□ 0.53
SIL1-202ENST00000394817 VCLP18206 1134 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 ACRV1P26436 265 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 GKP32189 559 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 HNF1BP35680 557 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 NME5P56597 212 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 RHDQ02161 417 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 PCBP2Q15366 365 aaKnown RBP eCLIP18.37■□□□□ 0.533e-8■■■□□ 18.9
SIL1-202ENST00000394817 LYPLAL1Q5VWZ2 237 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 BLOC1S3Q6QNY0 202 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 TPGS1Q6ZTW0 290 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 FRA10AC1Q70Z53 315 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 OR2AP1Q8NGE2 309 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 CLP1Q92989 425 aaKnown RBP18.37■□□□□ 0.53
SIL1-202ENST00000394817 DUS3LQ96G46 650 aaKnown RBP18.37■□□□□ 0.53
SIL1-202ENST00000394817 PKP2Q99959 881 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 HOPXQ9BPY8 73 aaPredicted RBP18.37■□□□□ 0.53
SIL1-202ENST00000394817 SLC39A3Q9BRY0 314 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 BRINP2Q9C0B6 783 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 CIPCQ9C0C6 399 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 SLC52A3Q9NQ40 469 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 INSL6Q9Y581 213 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 ST14Q9Y5Y6 855 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 TCRBV3S1A0A5B6 114 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 NRG2O14511 850 aaPredicted RBP18.37■□□□□ 0.53
SIL1-202ENST00000394817 CLDN7O95471 211 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 BPIP17213 487 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 PFKLP17858 780 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 SERPINA4P29622 427 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 CA5AP35218 305 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 RPS6KA2Q15349 733 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 DGKKQ5KSL6 1271 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 LILRA6Q6PI73 481 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 CCDC149Q6ZUS6 474 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 MINDY1Q8N5J2 469 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 TMEM102Q8N9M5 508 aaPredicted RBP18.37■□□□□ 0.53
SIL1-202ENST00000394817 PDPRQ8NCN5 879 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 ESAMQ96AP7 390 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 LMLNQ96KR4 655 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 LYSMD1Q96S90 227 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 BOCQ9BWV1 1114 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 TNKS2Q9H2K2 1166 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 PDP2Q9P2J9 529 aa18.37■□□□□ 0.53
SIL1-202ENST00000394817 TNPO3Q9Y5L0 923 aaKnown RBP18.37■□□□□ 0.53
SIL1-202ENST00000394817 GLYATL1P3A0A0U1RQE8 302 aa18.36■□□□□ 0.53
SIL1-202ENST00000394817 A0A1W2PRU2 124 aa18.36■□□□□ 0.53
SIL1-202ENST00000394817 FXYD1O00168 92 aa18.36■□□□□ 0.53
SIL1-202ENST00000394817 LEFTY2O00292 366 aa18.36■□□□□ 0.53
SIL1-202ENST00000394817 C8AP07357 584 aa18.36■□□□□ 0.53
SIL1-202ENST00000394817 RGS4P49798 205 aa18.36■□□□□ 0.53
SIL1-202ENST00000394817 DIO3P55073 304 aa18.36■□□□□ 0.53
SIL1-202ENST00000394817 RCAN2Q14206 197 aa18.36■□□□□ 0.53
SIL1-202ENST00000394817 VPS26BQ4G0F5 336 aa18.36■□□□□ 0.53
SIL1-202ENST00000394817 ZSWIM9Q86XI8 627 aa18.36■□□□□ 0.53
SIL1-202ENST00000394817 CBARPQ8N350 705 aaPredicted RBP18.36■□□□□ 0.53
SIL1-202ENST00000394817 LKAAEAR1Q8TD35 194 aa18.36■□□□□ 0.53
SIL1-202ENST00000394817 ATP6V1E2Q96A05 226 aa18.36■□□□□ 0.53
SIL1-202ENST00000394817 VOPP1Q96AW1 172 aa18.36■□□□□ 0.53
SIL1-202ENST00000394817 GCNAQ96QF7 691 aa18.36■□□□□ 0.53
SIL1-202ENST00000394817 TUBGCP5Q96RT8 1024 aa18.36■□□□□ 0.53
SIL1-202ENST00000394817 RNASEH2AO75792 299 aaKnown RBP18.35■□□□□ 0.53
SIL1-202ENST00000394817 OR4F21O95013 312 aa18.35■□□□□ 0.53
SIL1-202ENST00000394817 CXCL14O95715 111 aa18.35■□□□□ 0.53
SIL1-202ENST00000394817 SPAM1P38567 509 aa18.35■□□□□ 0.53
SIL1-202ENST00000394817 ERVK-8P63133 956 aa18.35■□□□□ 0.53
SIL1-202ENST00000394817 FOXM1Q08050 763 aa18.35■□□□□ 0.53
SIL1-202ENST00000394817 GPR33Q49SQ1 333 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms