RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 EMX2Q04743 252 aa18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 RAD51Q06609 339 aa18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 NEDD8Q15843 81 aa18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 FXNQ16595 210 aa18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 AASDHQ4L235 1098 aaPredicted RBP18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 TBC1D15Q8TC07 691 aa18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 BPIFB1Q8TDL5 484 aa18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 OSCP1Q8WVF1 389 aa18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 MYEOVQ96EZ4 313 aa18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 CHID1Q9BWS9 393 aa18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 C1QTNF3Q9BXJ4 246 aa18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 YTHDF1Q9BYJ9 559 aaKnown RBP18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 CRISPLD2Q9H0B8 497 aa18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 PKD2L2Q9NZM6 624 aa18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 IFT80Q9P2H3 777 aaPredicted RBP18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 RIMKLBQ9ULI2 386 aa18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 TDRKHQ9Y2W6 561 aaKnown RBP18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 STX16O14662 325 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 PRAMEF11O60813 436 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 EPOP01588 193 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 HNRNPCP07910 306 aaKnown RBP eCLIP18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 POLR2IP36954 125 aaKnown RBP18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 HLCSP50747 726 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 LBX1P52954 281 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 ZNF235Q14590 738 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 TCTN1Q2MV58 587 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 PARP15Q460N3 678 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 CCNYL2Q5T2Q4 361 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 ZNF598Q86UK7 904 aaKnown RBP18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 RIMKLAQ8IXN7 391 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 ISG20Q96AZ6 181 aaKnown RBP18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 BTN2A3PQ96KV6 586 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 GPR21Q99679 349 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 TBCCD1Q9NVR7 557 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 ZNF510Q9Y2H8 683 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 SPO11Q9Y5K1 396 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 DYTNA2CJ06 578 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 FAM234BA2RU67 622 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 DRGXA6NNA5 263 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 KLK8O60259 260 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 HMBSP08397 361 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 ZNF140P52738 457 aaPredicted RBP18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 ERVK-8P63133 956 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 RBBP7Q16576 425 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 SLC2A7Q6PXP3 512 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 PROSER1Q86XN7 944 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 TERB1Q8NA31 727 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 ESAMQ96AP7 390 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 SCLYQ96I15 445 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 RNF145Q96MT1 663 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 RPRD1AQ96P16 312 aaPredicted RBP18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 TRIB3Q96RU7 358 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 HGH1Q9BTY7 390 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 NTN4Q9HB63 628 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 NLE1Q9NVX2 485 aaPredicted RBP18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 PCDHB8Q9UN66 801 aa18.15■□□□□ 0.5
PCDHA1-202ENST00000394633 SYCE1LA8MT33 242 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 BTN3A1O00481 513 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 CHEK2O96017 543 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 ENO2P09104 434 aaPredicted RBP18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 BTG3Q14201 252 aaPredicted RBP18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 TRIM60Q495X7 471 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 EFL1Q7Z2Z2 1120 aaKnown RBP18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 MIB1Q86YT6 1006 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 PROKR1Q8TCW9 393 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 TANKQ92844 425 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 UROC1Q96N76 676 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 PAIP1Q9H074 479 aaKnown RBP18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 ZIM2Q9NZV7 527 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 ASB1Q9Y576 335 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 ACTL7AQ9Y615 435 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 H0YAE9 185 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 UPK1AO00322 258 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 B4GALT3O60512 393 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 CPNE6O95741 557 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 NDST3O95803 873 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 INHBBP09529 407 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 TFPTP0C1Z6 253 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 ELK4P28324 431 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 OR1E1P30953 314 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 HK3P52790 923 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 TRIP4Q15650 581 aaPredicted RBP18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 ZIK1Q3SY52 487 aaPredicted RBP18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 C6orf136Q5SQH8 315 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 OTUD3Q5T2D3 398 aaPredicted RBP18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 GLYATQ6IB77 296 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 TMEM214Q6NUQ4 689 aaKnown RBP18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 FAM117BQ6P1L5 589 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 FBXO46Q6PJ61 603 aaPredicted RBP18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 XKR5Q6UX68 686 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 SLC39A5Q6ZMH5 540 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 RALGPS2Q86X27 583 aaPredicted RBP18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 ZFAND4Q86XD8 727 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 DBF4BQ8NFT6 615 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 NSMCE3Q96MG7 304 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 BDH2Q9BUT1 245 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 LRRC3Q9BY71 257 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 CCDC68Q9H2F9 335 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 FBXO44Q9H4M3 255 aa18.14■□□□□ 0.49
PCDHA1-202ENST00000394633 PDFQ9HBH1 243 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms