RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 ADGRE3Q9BY15 652 aa15.09■□□□□ 0.01
CHMP3-202ENST00000393773 AKIRIN1Q9H9L7 192 aaPredicted RBP15.09■□□□□ 0.01
CHMP3-202ENST00000393773 ZFYVE1Q9HBF4 777 aa15.09■□□□□ 0.01
CHMP3-202ENST00000393773 WASH6PQ9NQA3 447 aa15.09■□□□□ 0.01
CHMP3-202ENST00000393773 TMPRSS11EQ9UL52 423 aa15.09■□□□□ 0.01
CHMP3-202ENST00000393773 ZNF711Q9Y462 761 aa15.09■□□□□ 0.01
CHMP3-202ENST00000393773 NUP210LQ5VU65 1888 aa15.08■□□□□ 0.01
CHMP3-202ENST00000393773 IGHV5-51A0A0C4DH38 117 aa15.08■□□□□ 0
CHMP3-202ENST00000393773 TTLL8A6PVC2 850 aa15.08■□□□□ 0
CHMP3-202ENST00000393773 KCNK1O00180 336 aa15.08■□□□□ 0
CHMP3-202ENST00000393773 SEMA7AO75326 666 aa15.08■□□□□ 0
CHMP3-202ENST00000393773 FOLR1P15328 257 aa15.08■□□□□ 0
CHMP3-202ENST00000393773 PGDP52209 483 aa15.08■□□□□ 0
CHMP3-202ENST00000393773 IFI35P80217 286 aaPredicted RBP15.08■□□□□ 0
CHMP3-202ENST00000393773 PPIDQ08752 370 aaKnown RBP15.08■□□□□ 0
CHMP3-202ENST00000393773 CHAF1BQ13112 559 aa15.08■□□□□ 0
CHMP3-202ENST00000393773 KCNAB1Q14722 419 aa15.08■□□□□ 0
CHMP3-202ENST00000393773 NADK2Q4G0N4 442 aa15.08■□□□□ 0
CHMP3-202ENST00000393773 PAPD7Q5XG87 772 aaKnown RBP15.08■□□□□ 0
CHMP3-202ENST00000393773 TMC3Q7Z5M5 1100 aa15.08■□□□□ 0
CHMP3-202ENST00000393773 EFCAB3Q8N7B9 438 aa15.08■□□□□ 0
CHMP3-202ENST00000393773 CXorf40BQ96DE9 158 aa15.08■□□□□ 0
CHMP3-202ENST00000393773 SHOC2Q9UQ13 582 aa15.08■□□□□ 0
CHMP3-202ENST00000393773 WDR37Q9Y2I8 494 aa15.08■□□□□ 0
CHMP3-202ENST00000393773 MAP4K5Q9Y4K4 846 aa15.08■□□□□ 0
CHMP3-202ENST00000393773 PCDHGA9Q9Y5G4 932 aaKnown RBP15.08■□□□□ 0
CHMP3-202ENST00000393773 PCM1Q15154 2024 aa15.08■□□□□ 0
CHMP3-202ENST00000393773 CREBBPQ92793 2442 aa15.07■□□□□ 0
CHMP3-202ENST00000393773 A0A1B0GTH6 734 aa15.07■□□□□ 0
CHMP3-202ENST00000393773 VEGFDO43915 354 aa15.07■□□□□ 0
CHMP3-202ENST00000393773 JCHAINP01591 159 aa15.07■□□□□ 0
CHMP3-202ENST00000393773 EBLN1P0CF75 366 aa15.07■□□□□ 0
CHMP3-202ENST00000393773 BPIP17213 487 aa15.07■□□□□ 0
CHMP3-202ENST00000393773 MX2P20592 715 aa15.07■□□□□ 0
CHMP3-202ENST00000393773 PTPN4P29074 926 aa15.07■□□□□ 0
CHMP3-202ENST00000393773 SSR1P43307 286 aaKnown RBP15.07■□□□□ 0
CHMP3-202ENST00000393773 PDK2Q15119 407 aa15.07■□□□□ 0
CHMP3-202ENST00000393773 HADHQ16836 314 aaKnown RBP15.07■□□□□ 0
CHMP3-202ENST00000393773 PRR30Q53SZ7 412 aaPredicted RBP15.07■□□□□ 0
CHMP3-202ENST00000393773 FAM182AQ5T1J6 154 aa15.07■□□□□ 0
CHMP3-202ENST00000393773 FAM199XQ6PEV8 388 aaPredicted RBP15.07■□□□□ 0
CHMP3-202ENST00000393773 CERS6Q6ZMG9 384 aa15.07■□□□□ 0
CHMP3-202ENST00000393773 SYVN1Q86TM6 617 aa15.07■□□□□ 0
CHMP3-202ENST00000393773 THAP4Q8WY91 577 aa15.07■□□□□ 0
CHMP3-202ENST00000393773 SEC14L1Q92503 715 aa15.07■□□□□ 0
CHMP3-202ENST00000393773 UBXN4Q92575 508 aa15.07■□□□□ 0
CHMP3-202ENST00000393773 TADA1Q96BN2 335 aa15.07■□□□□ 0
CHMP3-202ENST00000393773 FCRL4Q96PJ5 515 aa15.07■□□□□ 0
CHMP3-202ENST00000393773 VPS35Q96QK1 796 aa15.07■□□□□ 0
CHMP3-202ENST00000393773 MAGEE1Q9HCI5 957 aa15.07■□□□□ 0
CHMP3-202ENST00000393773 PDE7BQ9NP56 450 aa15.07■□□□□ 0
CHMP3-202ENST00000393773 RAD18Q9NS91 495 aa15.07■□□□□ 0
CHMP3-202ENST00000393773 RARRES3Q9UL19 164 aa15.07■□□□□ 0
CHMP3-202ENST00000393773 TEP1Q99973 2627 aaKnown RBP15.07■□□□□ 0
CHMP3-202ENST00000393773 IDSP22304 550 aa15.06■□□□□ 0
CHMP3-202ENST00000393773 FECHP22830 423 aa15.06■□□□□ 0
CHMP3-202ENST00000393773 TAS2R40P59535 323 aa15.06■□□□□ 0
CHMP3-202ENST00000393773 TYRO3Q06418 890 aa15.06■□□□□ 0
CHMP3-202ENST00000393773 PLD5Q8N7P1 536 aa15.06■□□□□ 0
CHMP3-202ENST00000393773 SIDT2Q8NBJ9 832 aaKnown RBP15.06■□□□□ 0
CHMP3-202ENST00000393773 IMP4Q96G21 291 aaKnown RBP15.06■□□□□ 0
CHMP3-202ENST00000393773 ZNF514Q96K75 400 aaPredicted RBP15.06■□□□□ 0
CHMP3-202ENST00000393773 SLC25A23Q9BV35 468 aa15.06■□□□□ 0
CHMP3-202ENST00000393773 GPR87Q9BY21 358 aa15.06■□□□□ 0
CHMP3-202ENST00000393773 CEP41Q9BYV8 373 aa15.06■□□□□ 0
CHMP3-202ENST00000393773 TRIM10Q9UDY6 481 aa15.06■□□□□ 0
CHMP3-202ENST00000393773 SPO11Q9Y5K1 396 aa15.06■□□□□ 0
CHMP3-202ENST00000393773 A0A087X0T9 212 aa15.05■□□□□ -0
CHMP3-202ENST00000393773 ARGFXA6NJG6 315 aa15.05■□□□□ -0
CHMP3-202ENST00000393773 MYO1FO00160 1098 aa15.05■□□□□ -0
CHMP3-202ENST00000393773 AURKAO14965 403 aa15.05■□□□□ -0
CHMP3-202ENST00000393773 CPNE3O75131 537 aaKnown RBP15.05■□□□□ -0
CHMP3-202ENST00000393773 CEACAM4O75871 244 aa15.05■□□□□ -0
CHMP3-202ENST00000393773 CDK14O94921 469 aa15.05■□□□□ -0
CHMP3-202ENST00000393773 FAM228BP0C875 321 aa15.05■□□□□ -0
CHMP3-202ENST00000393773 PTGIRP43119 386 aa15.05■□□□□ -0
CHMP3-202ENST00000393773 DMPKQ09013 629 aa15.05■□□□□ -0
CHMP3-202ENST00000393773 GPS2Q13227 327 aa15.05■□□□□ -0
CHMP3-202ENST00000393773 ATP13A5Q4VNC0 1218 aa15.05■□□□□ -0
CHMP3-202ENST00000393773 FIGNQ5HY92 759 aa15.05■□□□□ -0
CHMP3-202ENST00000393773 ZNF517Q6ZMY9 492 aaPredicted RBP15.05■□□□□ -0
CHMP3-202ENST00000393773 TRAPPC5Q8IUR0 188 aa15.05■□□□□ -0
CHMP3-202ENST00000393773 Q8NA96 180 aa15.05■□□□□ -0
CHMP3-202ENST00000393773 KCTD6Q8NC69 237 aa15.05■□□□□ -0
CHMP3-202ENST00000393773 CCNYQ8ND76 341 aa15.05■□□□□ -0
CHMP3-202ENST00000393773 ADAMTS17Q8TE56 1095 aa15.05■□□□□ -0
CHMP3-202ENST00000393773 NAP1L5Q96NT1 182 aaPredicted RBP15.05■□□□□ -0
CHMP3-202ENST00000393773 MAP3K3Q99759 626 aa15.05■□□□□ -0
CHMP3-202ENST00000393773 BPIFA3Q9BQP9 254 aa15.05■□□□□ -0
CHMP3-202ENST00000393773 FGF21Q9NSA1 209 aa15.05■□□□□ -0
CHMP3-202ENST00000393773 CUEDC1Q9NWM3 386 aaPredicted RBP15.05■□□□□ -0
CHMP3-202ENST00000393773 NENFQ9UMX5 172 aa15.05■□□□□ -0
CHMP3-202ENST00000393773 CCDC88CQ9P219 2028 aa15.04■□□□□ -0
CHMP3-202ENST00000393773 TLCD2A6NGC4 264 aa15.04■□□□□ -0
CHMP3-202ENST00000393773 PROSCO94903 275 aa15.04■□□□□ -0
CHMP3-202ENST00000393773 ACY1Q03154 408 aa15.04■□□□□ -0
CHMP3-202ENST00000393773 SLC14A2Q15849 920 aa15.04■□□□□ -0
CHMP3-202ENST00000393773 PCSK7Q16549 785 aa15.04■□□□□ -0
CHMP3-202ENST00000393773 ANO6Q4KMQ2 910 aa15.04■□□□□ -0
CHMP3-202ENST00000393773 FAM83HQ6ZRV2 1179 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms