RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 NMBRP28336 390 aa18.7■□□□□ 0.58
PDLIM7-204ENST00000393546 FOXN2P32314 431 aa18.7■□□□□ 0.58
PDLIM7-204ENST00000393546 PPARGP37231 505 aaPredicted RBP18.7■□□□□ 0.58
PDLIM7-204ENST00000393546 MAZP56270 477 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-204ENST00000393546 B4GALNT1Q00973 533 aa18.7■□□□□ 0.58
PDLIM7-204ENST00000393546 FASTKD1Q53R41 847 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-204ENST00000393546 CERS6Q6ZMG9 384 aa18.7■□□□□ 0.58
PDLIM7-204ENST00000393546 TMPRSS7Q7RTY8 843 aa18.7■□□□□ 0.58
PDLIM7-204ENST00000393546 MAATS1Q7Z4T9 603 aa18.7■□□□□ 0.58
PDLIM7-204ENST00000393546 C11orf96Q7Z7L8 435 aa18.7■□□□□ 0.58
PDLIM7-204ENST00000393546 HOOK3Q86VS8 718 aa18.7■□□□□ 0.58
PDLIM7-204ENST00000393546 PATE1Q8WXA2 126 aa18.7■□□□□ 0.58
PDLIM7-204ENST00000393546 CCDC74AQ96AQ1 378 aa18.7■□□□□ 0.58
PDLIM7-204ENST00000393546 CCDC3Q9BQI4 270 aa18.7■□□□□ 0.58
PDLIM7-204ENST00000393546 SCNM1Q9BWG6 230 aa18.7■□□□□ 0.58
PDLIM7-204ENST00000393546 TREX1Q9NSU2 369 aa18.7■□□□□ 0.58
PDLIM7-204ENST00000393546 CDC23Q9UJX2 597 aa18.7■□□□□ 0.58
PDLIM7-204ENST00000393546 WASF3Q9UPY6 502 aa18.7■□□□□ 0.58
PDLIM7-204ENST00000393546 RNF215Q9Y6U7 377 aa18.7■□□□□ 0.58
PDLIM7-204ENST00000393546 NCOR2Q9Y618 2525 aa18.69■□□□□ 0.58
PDLIM7-204ENST00000393546 IGLV3-16A0A075B6K0 115 aa18.69■□□□□ 0.58
PDLIM7-204ENST00000393546 KLHL33A6NCF5 533 aa18.69■□□□□ 0.58
PDLIM7-204ENST00000393546 RHPN2P1A8MT19 583 aa18.69■□□□□ 0.58
PDLIM7-204ENST00000393546 SMAPO00193 183 aa18.69■□□□□ 0.58
PDLIM7-204ENST00000393546 JUPP14923 745 aa18.69■□□□□ 0.58
PDLIM7-204ENST00000393546 IVDP26440 423 aa18.69■□□□□ 0.58
PDLIM7-204ENST00000393546 SHC2P98077 582 aa18.69■□□□□ 0.58
PDLIM7-204ENST00000393546 INSM1Q01101 510 aaPredicted RBP18.69■□□□□ 0.58
PDLIM7-204ENST00000393546 CKAP4Q07065 602 aaKnown RBP18.69■□□□□ 0.58
PDLIM7-204ENST00000393546 ITIH4Q14624 930 aa18.69■□□□□ 0.58
PDLIM7-204ENST00000393546 DBN1Q16643 649 aa18.69■□□□□ 0.58
PDLIM7-204ENST00000393546 BCL7AQ4VC05 210 aa18.69■□□□□ 0.58
PDLIM7-204ENST00000393546 IYDQ6PHW0 289 aa18.69■□□□□ 0.58
PDLIM7-204ENST00000393546 CES3Q6UWW8 571 aa18.69■□□□□ 0.58
PDLIM7-204ENST00000393546 MICALCLQ6ZW33 695 aa18.69■□□□□ 0.58
PDLIM7-204ENST00000393546 MPP5Q8N3R9 675 aa18.69■□□□□ 0.58
PDLIM7-204ENST00000393546 WDR48Q8TAF3 677 aa18.69■□□□□ 0.58
PDLIM7-204ENST00000393546 TRIM51Q9BSJ1 452 aa18.69■□□□□ 0.58
PDLIM7-204ENST00000393546 PRDM8Q9NQV8 689 aa18.69■□□□□ 0.58
PDLIM7-204ENST00000393546 CATSPERZQ9NTU4 200 aa18.69■□□□□ 0.58
PDLIM7-204ENST00000393546 NEUROG3Q9Y4Z2 214 aa18.69■□□□□ 0.58
PDLIM7-204ENST00000393546 RP1P56715 2156 aa18.69■□□□□ 0.58
PDLIM7-204ENST00000393546 KNTC1P50748 2209 aa18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 KIR2DS5A0A0G2JLQ3 304 aa18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 A0A0G2JNG1 304 aa18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 FAM187AA6NFU0 413 aa18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 PDZK1P1A8MUH7 402 aa18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 KIR2DS3K7RE56 304 aa18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 ZW10O43264 779 aa18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 EML2O95834 649 aa18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 F3P13726 295 aa18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 PAMP19021 973 aa18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 SPINK2P20155 84 aa18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 NSG1P42857 185 aa18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 C2orf54Q08AI8 447 aa18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 DMPKQ09013 629 aa18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 KIR2DS5Q14953 304 aa18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 MORF4L2Q15014 288 aa18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 AARS2Q5JTZ9 985 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 HES3Q5TGS1 186 aa18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 SFRP1Q8N474 314 aa18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 BEND7Q8N7W2 519 aaPredicted RBP18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 MFSD3Q96ES6 412 aa18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 LINC00615Q96LM1 132 aaPredicted RBP18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 TRIM31Q9BZY9 425 aa18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 STN1Q9H668 368 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 KLK13Q9UKR3 277 aa18.68■□□□□ 0.58
PDLIM7-204ENST00000393546 FAM237BA0A1B0GVD1 139 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 FAM221BA6H8Z2 402 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 A6NCN8 305 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 MGAT4DA6NG13 374 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 PRR19A6NJB7 356 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 EFCAB8A8MWE9 144 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 NDC80O14777 642 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 CD3EAPO15446 510 aaKnown RBP18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 SGTAO43765 313 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 AP2A2O94973 939 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 VAPBO95292 243 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 MT-CO3P00414 261 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 PBLDP30039 288 aaPredicted RBP18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 MAGEA3P43357 314 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 TUBB2AQ13885 445 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 AGAP9Q5VTM2 703 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 WASH2PQ6VEQ5 465 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 ZNF572Q7Z3I7 529 aaPredicted RBP18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 SLC9B2Q86UD5 537 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 CACTIN-AS1Q8N1I8 211 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 Q8N9G6 341 aaPredicted RBP18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 AVL9Q8NBF6 648 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 OR2L2Q8NH16 312 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 SLC37A2Q8TED4 501 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 NAT14Q8WUY8 206 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 CCDC97Q96F63 343 aaPredicted RBP18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 SNF8Q96H20 258 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 SIGLEC10Q96LC7 697 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 TUBB2BQ9BVA1 445 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 VPS37BQ9H9H4 285 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 WASH6PQ9NQA3 447 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 RABGEF1Q9UJ41 708 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 MAD1L1Q9Y6D9 718 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms