RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 CCSER2Q9H7U1 834 aa18.64■□□□□ 0.57
CBX1-202ENST00000393408 RHBDL2Q9NX52 303 aa18.64■□□□□ 0.57
CBX1-202ENST00000393408 LMCD1Q9NZU5 365 aa18.64■□□□□ 0.57
CBX1-202ENST00000393408 TRMT6Q9UJA5 497 aaKnown RBP18.64■□□□□ 0.57
CBX1-202ENST00000393408 PCDHB3Q9Y5E6 796 aa18.64■□□□□ 0.57
CBX1-202ENST00000393408 C2orf81A6NN90 581 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 H0YAE9 185 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 TMX2-CTNND1H3BSU7 103 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 OR1I1O60431 355 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 CD9P21926 228 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 KCNQ1P51787 676 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 PRKG2Q13237 762 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 CTXN3Q4LDR2 81 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 GPR107Q5VW38 600 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 ELMSAN1Q6PJG2 1045 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 DLEU7Q6UYE1 221 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 KCTD8Q6ZWB6 473 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 CD200R1Q8TD46 325 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 NSMCE2Q96MF7 247 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 RNF145Q96MT1 663 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 BDH2Q9BUT1 245 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 CINPQ9BW66 212 aaPredicted RBP18.63■□□□□ 0.57
CBX1-202ENST00000393408 SPC25Q9HBM1 224 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 PKD2L2Q9NZM6 624 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 CD274Q9NZQ7 290 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 VPS9D1Q9Y2B5 631 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 H0Y858 1186 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 INSIG1O15503 277 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 CDH1P12830 882 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 CR2P20023 1033 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 SLC6A4P31645 630 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 HLCSP50747 726 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 SCNN1BP51168 640 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 ERVPABLB-1P60509 514 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 IL2P60568 153 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 ATP6AP1LQ52LC2 224 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 CCNYL2Q5T2Q4 361 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 GLYATQ6IB77 296 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 RTN4RL1Q86UN2 441 aaPredicted RBP18.63■□□□□ 0.57
CBX1-202ENST00000393408 DCBLD1Q8N8Z6 715 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 LEMD2Q8NC56 503 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 OR52B6Q8NGF0 335 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 EXOC2Q96KP1 924 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 TDRD1Q9BXT4 1180 aaKnown RBP18.63■□□□□ 0.57
CBX1-202ENST00000393408 NTN4Q9HB63 628 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 TLR9Q9NR96 1032 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 HEBP1Q9NRV9 189 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 UBA2Q9UBT2 640 aaPredicted RBP18.63■□□□□ 0.57
CBX1-202ENST00000393408 MAGEL2Q9UJ55 1249 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 SLC27A5Q9Y2P5 690 aa18.63■□□□□ 0.57
CBX1-202ENST00000393408 SH3PXD2BA1X283 911 aa18.62■□□□□ 0.57
CBX1-202ENST00000393408 PLCL1Q15111 1095 aa18.62■□□□□ 0.57
CBX1-202ENST00000393408 RALGPS2Q86X27 583 aaPredicted RBP18.62■□□□□ 0.57
CBX1-202ENST00000393408 SFRP1Q8N474 314 aa18.62■□□□□ 0.57
CBX1-202ENST00000393408 TERB1Q8NA31 727 aa18.62■□□□□ 0.57
CBX1-202ENST00000393408 CDK15Q96Q40 435 aa18.62■□□□□ 0.57
CBX1-202ENST00000393408 DNAAF2Q9NVR5 837 aaKnown RBP18.62■□□□□ 0.57
CBX1-202ENST00000393408 FKBPLQ9UIM3 349 aa18.62■□□□□ 0.57
CBX1-202ENST00000393408 NOD1Q9Y239 953 aa18.62■□□□□ 0.57
CBX1-202ENST00000393408 ARIH1Q9Y4X5 557 aaPredicted RBP18.62■□□□□ 0.57
CBX1-202ENST00000393408 ST14Q9Y5Y6 855 aa18.62■□□□□ 0.57
CBX1-202ENST00000393408 TRIM64BA6NI03 449 aa18.62■□□□□ 0.57
CBX1-202ENST00000393408 MAGEB3O15480 346 aa18.62■□□□□ 0.57
CBX1-202ENST00000393408 ASGR1P07306 291 aa18.62■□□□□ 0.57
CBX1-202ENST00000393408 LPOP22079 712 aaPredicted RBP18.62■□□□□ 0.57
CBX1-202ENST00000393408 MC4RP32245 332 aa18.62■□□□□ 0.57
CBX1-202ENST00000393408 YAP1P46937 504 aaKnown RBP18.62■□□□□ 0.57
CBX1-202ENST00000393408 TTPAP49638 278 aa18.62■□□□□ 0.57
CBX1-202ENST00000393408 SELPLGQ14242 412 aa18.62■□□□□ 0.57
CBX1-202ENST00000393408 CRY1Q16526 586 aa18.62■□□□□ 0.57
CBX1-202ENST00000393408 TRIM71Q2Q1W2 868 aaKnown RBP18.62■□□□□ 0.57
CBX1-202ENST00000393408 FAM26DQ5JW98 314 aa18.62■□□□□ 0.57
CBX1-202ENST00000393408 LETMD1Q6P1Q0 360 aa18.62■□□□□ 0.57
CBX1-202ENST00000393408 PRR23BQ6ZRT6 265 aa18.62■□□□□ 0.57
CBX1-202ENST00000393408 TMEM26Q6ZUK4 368 aa18.62■□□□□ 0.57
CBX1-202ENST00000393408 CPNE9Q8IYJ1 553 aa18.62■□□□□ 0.57
CBX1-202ENST00000393408 SPON2Q9BUD6 331 aa18.62■□□□□ 0.57
CBX1-202ENST00000393408 IFT80Q9P2H3 777 aaPredicted RBP18.62■□□□□ 0.57
CBX1-202ENST00000393408 PCDHGA11Q9Y5H2 935 aa18.62■□□□□ 0.57
CBX1-202ENST00000393408 UPK1AO00322 258 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 SYN3O14994 580 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 TLR5O60602 858 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 PRSS23O95084 383 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 DTWD1Q8N5C7 304 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 ABTB1Q969K4 478 aaPredicted RBP18.61■□□□□ 0.57
CBX1-202ENST00000393408 SYT17Q9BSW7 474 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 CRISPLD1Q9H336 500 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 ACTL8Q9H568 366 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 H3BNC9 293 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 ARNTLO00327 626 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 ADAMTS4O75173 837 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 EOMESO95936 686 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 ALBP02768 609 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 CTGFP29279 349 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 HTR6P50406 440 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 ARPP19P56211 112 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 NKX3-2P78367 333 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 C16orf72Q14CZ0 275 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 TGFBIQ15582 683 aa18.61■□□□□ 0.57
CBX1-202ENST00000393408 AARS2Q5JTZ9 985 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms