RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 APPL1Q9UKG1 709 aa7.55□□□□□ -1.2
HMGB3P1-201ENST00000393368 PSMD13Q9UNM6 376 aa7.55□□□□□ -1.2
HMGB3P1-201ENST00000393368 SATB2Q9UPW6 733 aa7.55□□□□□ -1.2
HMGB3P1-201ENST00000393368 DRG1Q9Y295 367 aaKnown RBP7.55□□□□□ -1.2
HMGB3P1-201ENST00000393368 WDR37Q9Y2I8 494 aa7.55□□□□□ -1.2
HMGB3P1-201ENST00000393368 ZKSCAN5Q9Y2L8 839 aa7.55□□□□□ -1.2
HMGB3P1-201ENST00000393368 AK5Q9Y6K8 562 aa7.55□□□□□ -1.2
HMGB3P1-201ENST00000393368 IGF2RP11717 2491 aa7.55□□□□□ -1.2
HMGB3P1-201ENST00000393368 MROH6A6NGR9 719 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 PRR19A6NJB7 356 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 ERI2A8K979 691 aaKnown RBP7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 GPR89AB7ZAQ6 455 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 GOLGA8MH3BSY2 632 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 TLX3O43711 291 aaPredicted RBP7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 PPFIA2O75334 1257 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 AVILO75366 819 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 TCEA3O75764 348 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 TMEM63AO94886 807 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 KRT14P02533 472 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 GPR89BP0CG08 455 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 F3P13726 295 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 BRAFP15056 766 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 MSNP26038 577 aaKnown RBP7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 MGAT1P26572 445 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 CD1CP29017 333 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 COILP38432 576 aaPredicted RBP7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 HADHAP40939 763 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 PDE1BQ01064 536 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 HHEXQ03014 270 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 CFHR1Q03591 330 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 CCDC173Q0VFZ6 552 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 GPS1Q13098 491 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 CLCA4Q14CN2 919 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 DBN1Q16643 649 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 DUS1LQ6P1R4 473 aaKnown RBP7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 IYDQ6PHW0 289 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 CCDC137Q6PK04 289 aaKnown RBP7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 CES3Q6UWW8 571 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 XKR5Q6UX68 686 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 ZNF574Q6ZN55 896 aaPredicted RBP7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 ZNF438Q7Z4V0 828 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 SNX20Q7Z614 316 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 LINC00523Q86TU6 105 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 SERPINA9Q86WD7 417 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 PROSER1Q86XN7 944 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 NXPE1Q8N323 547 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 CLDN19Q8N6F1 224 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 RCBTB1Q8NDN9 531 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 OR6C4Q8NGE1 309 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 OR13J1Q8NGT2 312 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 GPR150Q8NGU9 434 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 DTX3LQ8TDB6 740 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 CDKN2AIPNLQ96HQ2 116 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 SLC38A3Q99624 504 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 TRIM56Q9BRZ2 755 aaKnown RBP7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 TIMM29Q9BSF4 260 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 ZMYND15Q9H091 742 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 DDX47Q9H0S4 455 aaKnown RBP7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 SYBUQ9NX95 663 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 KCNK4Q9NYG8 393 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 ZNF624Q9P2J8 865 aaPredicted RBP7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 CPNE7Q9UBL6 633 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 TCAF1Q9Y4C2 921 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 CFAP20Q9Y6A4 193 aaKnown RBP7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 PRSS21Q9Y6M0 314 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 SLC30A1Q9Y6M5 507 aa7.54□□□□□ -1.2
HMGB3P1-201ENST00000393368 USP24Q9UPU5 2620 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 ACACBO00763 2458 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 IGHV1OR21-1A0A087WYE8 117 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 TMEM8BA6NDV4 472 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 SRRM3A6NNA2 597 aaPredicted RBP7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 AGAP14A8MT82 685 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 PHF2O75151 1096 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 KRT37O76014 449 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 GOT2P00505 430 aaKnown RBP7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 POLBP06746 335 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 F7P08709 466 aaPredicted RBP7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 HOXB1P14653 301 aaPredicted RBP7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 PNLIPP16233 465 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 TYRP1P17643 537 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 ITIH1P19827 911 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 IDSP22304 550 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 ACRV1P26436 265 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 NMBRP28336 390 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 FOXN2P32314 431 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 SLC19A1P41440 591 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 FASLGP48023 281 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 CLCNKAP51800 687 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 INHBCP55103 352 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 UBE2IP63279 158 aaKnown RBP7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 CACNG1Q06432 222 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 SEMA3AQ14563 771 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 KCNJ11Q14654 390 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 NR1D2Q14995 579 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 C16orf72Q14CZ0 275 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 RTP5Q14D33 572 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 CYP1B1Q16678 543 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 SNAP47Q5SQN1 464 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 PHF19Q5T6S3 580 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms