RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 LSM7Q9UK45 103 aaKnown RBP18.83■□□□□ 0.6
CCDC50-202ENST00000392456 KDELR3O43731 214 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 XYLBO75191 536 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 ANXA9O76027 345 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 SORBS2O94875 1100 aaKnown RBP18.82■□□□□ 0.6
CCDC50-202ENST00000392456 HNRNPA1P09651 372 aaKnown RBP eCLIP18.82■□□□□ 0.6
CCDC50-202ENST00000392456 PSMC3P17980 439 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 PRKCHP24723 683 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 ARF5P84085 180 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 AARS2Q5JTZ9 985 aaKnown RBP18.82■□□□□ 0.6
CCDC50-202ENST00000392456 RARS2Q5T160 578 aaKnown RBP18.82■□□□□ 0.6
CCDC50-202ENST00000392456 ATAD3BQ5T9A4 648 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 RANBP10Q6VN20 620 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 IDO2Q6ZQW0 420 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 CTAGE3PQ8IX95 158 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 SEMA3CQ99985 751 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 FEM1AQ9BSK4 669 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 PPCSQ9HAB8 311 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 TDP1Q9NUW8 608 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 PSMC3IPQ9P2W1 217 aaPredicted RBP18.82■□□□□ 0.6
CCDC50-202ENST00000392456 OR51B4Q9Y5P0 310 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 A8MX80 341 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 CSKP41240 450 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 ESRRGP62508 458 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 ADGRD1Q6QNK2 874 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 APCDD1Q8J025 514 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 HJURPQ8NCD3 748 aaPredicted RBP18.82■□□□□ 0.6
CCDC50-202ENST00000392456 HIPK4Q8NE63 616 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 ZNF420Q8TAQ5 688 aaPredicted RBP18.82■□□□□ 0.6
CCDC50-202ENST00000392456 ALG14Q96F25 216 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 LRRC3BQ96PB8 259 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 NEK6Q9HC98 313 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 BFARQ9NZS9 450 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 SLC24A2Q9UI40 661 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 TRAF6Q9Y4K3 522 aa18.82■□□□□ 0.6
CCDC50-202ENST00000392456 MEI4A8MW99 385 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 TAF4O00268 1085 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 POLR1CO15160 346 aaPredicted RBP18.81■□□□□ 0.6
CCDC50-202ENST00000392456 ZNF254O75437 659 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 MT-CO1P00395 513 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 CDH17Q12864 832 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 POU6F1Q14863 301 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 STEAP4Q687X5 459 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 NAPEPLDQ6IQ20 393 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 PDE12Q6L8Q7 609 aaKnown RBP18.81■□□□□ 0.6
CCDC50-202ENST00000392456 RTL10Q7L3V2 364 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 TMEM25Q86YD3 366 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 TMEM126BQ8IUX1 230 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 IGFLR1Q9H665 355 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 THG1LQ9NWX6 298 aaKnown RBP18.81■□□□□ 0.6
CCDC50-202ENST00000392456 GIPC1O14908 333 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 ZMPSTE24O75844 475 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 GEMP55040 296 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 TNK2Q07912 1038 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 ARID3BQ8IVW6 561 aaPredicted RBP18.81■□□□□ 0.6
CCDC50-202ENST00000392456 CCDC28AQ8IWP9 274 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 ADCY4Q8NFM4 1077 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 SLC44A1Q8WWI5 657 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 PMEPA1Q969W9 287 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 CCDC106Q9BWC9 280 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 VPS11Q9H270 941 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 SLC28A3Q9HAS3 691 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 SCUBE2Q9NQ36 999 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 SEPT3Q9UH03 358 aa18.81■□□□□ 0.6
CCDC50-202ENST00000392456 GPC4O75487 556 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 SPAG6O75602 509 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 GSTM1P09488 218 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 ERVK-10P10266 1014 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 PGAM1P18669 254 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 TGM1P22735 817 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 CDH18Q13634 790 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 KCNC3Q14003 757 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 ZNF235Q14590 738 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 DUSP6Q16828 381 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 TTC39BQ5VTQ0 682 aaPredicted RBP18.8■□□□□ 0.6
CCDC50-202ENST00000392456 DEPDC4Q8N2C3 294 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 LILRB2Q8N423 598 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 HM13Q8TCT9 377 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 MZB1Q8WU39 189 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 SMG7Q92540 1137 aaKnown RBP18.8■□□□□ 0.6
CCDC50-202ENST00000392456 MAP6Q96JE9 813 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 FSD1LQ9BXM9 530 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 UBA2Q9UBT2 640 aaPredicted RBP18.8■□□□□ 0.6
CCDC50-202ENST00000392456 POMPQ9Y244 141 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 MYRFQ9Y2G1 1151 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 ZCWPW2A0A1B0GU75 182 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 K7ERQ8 282 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 ACOX3O15254 700 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 NMBRP28336 390 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 EPHB1P54762 984 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 TXNL4AP83876 142 aaKnown RBP18.8■□□□□ 0.6
CCDC50-202ENST00000392456 SLC25A3Q00325 362 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 TBCCQ15814 346 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 INAVAQ3KP66 663 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 TMEM135Q86UB9 458 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 TADA1Q96BN2 335 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 FEM1CQ96JP0 617 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 KLF6Q99612 283 aaPredicted RBP18.8■□□□□ 0.6
CCDC50-202ENST00000392456 RMND5AQ9H871 391 aa18.8■□□□□ 0.6
CCDC50-202ENST00000392456 IL20Q9NYY1 176 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms