RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 AOC1P19801 751 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 IL12RB1P42701 662 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 SATB1Q01826 763 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 ELP6Q0PNE2 266 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 GRIN2CQ14957 1233 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 TTLL9Q3SXZ7 439 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 NUDT18Q6ZVK8 323 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 RPS27LQ71UM5 84 aaKnown RBP11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 MTSS1LQ765P7 747 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 DSG4Q86SJ6 1040 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 GPSM1Q86YR5 675 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 TREML1Q86YW5 311 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 SCAMP4Q969E2 229 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 ARRDC3Q96B67 414 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 MSLNLQ96KJ4 702 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 CCDC28BQ9BUN5 200 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 NUF2Q9BZD4 464 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 CLDND1Q9NY35 253 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 NUDT4Q9NZJ9 180 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 SUN2Q9UH99 717 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 TICRRQ7Z2Z1 1910 aa11.3□□□□□ -0.6
SMARCAL1-203ENST00000392128 TMEM233B4DJY2 109 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 EIF3FO00303 357 aaPredicted RBP11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 UBFD1O14562 309 aaKnown RBP11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 SIX3O95343 332 aaPredicted RBP11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 APODP05090 189 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 RPS17P08708 135 aaKnown RBP11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 OR56A5P0C7T3 313 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 CBSLP0DN79 551 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 ITGB6P18564 788 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 PTPN4P29074 926 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 CBSP35520 551 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 LTBRP36941 435 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 HK3P52790 923 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 KCNJ2P63252 427 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 UBAP2LQ14157 1087 aaKnown RBP11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 TGFBIQ15582 683 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 SBSNQ6UWP8 590 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 ACAD11Q709F0 780 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 MYO1HQ8N1T3 1032 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 KIF2BQ8N4N8 673 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 DDHD1Q8NEL9 900 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 NAT14Q8WUY8 206 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 MAELQ96JY0 434 aaKnown RBP11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 VPS35Q96QK1 796 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 OR52B2Q96RD2 323 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 RPP25Q9BUL9 199 aaKnown RBP11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 SLC40A1Q9NP59 571 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 KCTD5Q9NXV2 234 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 CDYLQ9Y232 598 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 ANKRD12Q6UB98 2062 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 CKAP5Q14008 2032 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 PRR5-ARHGAP8B1AHC4 643 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 AREL1O15033 823 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 ESRRAP11474 423 aaPredicted RBP11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 ATP1B2P14415 290 aaPredicted RBP11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 GM2AP17900 193 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 EEF1DP29692 281 aaKnown RBP11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 METAP1P53582 386 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 ARHGAP8P85298 464 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 ENPP2Q13822 863 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 COL19A1Q14993 1142 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 ZNF284Q2VY69 593 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 ACSBG2Q5FVE4 666 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 ANKS6Q68DC2 871 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 FBXL19Q6PCT2 694 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 CYP2U1Q7Z449 544 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 COQ10AQ96MF6 247 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 NECTIN4Q96NY8 510 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 RIOK2Q9BVS4 552 aaKnown RBP11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 TNFRSF12AQ9NP84 129 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 PRSS16Q9NQE7 514 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 EPS15L1Q9UBC2 864 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 TAGLN3Q9UI15 199 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 ITM2BQ9Y287 266 aa11.29□□□□□ -0.6
SMARCAL1-203ENST00000392128 TTC36A6NLP5 189 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 FADS2P1A8MWK0 482 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 CFAP99D6REC4 459 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 C1QTNF3-AMACRE9PGA6 284 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 WNT9AO14904 365 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 SNX2O60749 519 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 RASSF9O75901 435 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 AP2A2O94973 939 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 JUNP05412 331 aaKnown RBP11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 EPHX1P07099 455 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 FGF4P08620 206 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 ADRB3P13945 408 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 INHBCP55103 352 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 ACOX1Q15067 660 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 E2F5Q15329 346 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 PDCD2Q16342 344 aaPredicted RBP11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 PPP1R3AQ16821 1122 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 LSM12Q3MHD2 195 aaKnown RBP11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 EGFLAMQ63HQ2 1017 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 SUGP1Q8IWZ8 645 aaKnown RBP11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 DCUN1D1Q96GG9 259 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 RAB3IPQ96QF0 476 aaPredicted RBP11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 ABCG8Q9H221 673 aa11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 WDR55Q9H6Y2 383 aaPredicted RBP11.28□□□□□ -0.6
SMARCAL1-203ENST00000392128 MEAF6Q9HAF1 191 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms